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Integrate ENERO Foundry ontologies into Semantic-SQL

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@cmungall 已经在做这个了。

开始于 2026年3月30日。

  • #108 来自 @cmungall —— 未关闭

评估

难度
4/5
预计耗时
3-5 天
新手友好度
48/100
Issue 类型
功能
描述清晰度
基本清楚
活跃度
冷清
技术栈
python, sql, sqlite
领域
databases

调研方向

从 src/semsql/builder/registry/ontologies.yaml 开始,尤其检查现有的 oeo 条目,并审核候选 ENERO 本体的发布 URL、序列化、imports 和许可。使用 rdftab 和 relation-graph 从干净的 checkout 中验证选定条目,然后检查至少有一个除 oeo 之外的本体能够成功构建,并且新的 ID 已有文档记录。

由索引模型根据 Issue 内容生成。

描述

enhancement

Summary

Add first-class support for ENERO Foundry ontologies in Semantic-SQL so they can be built and downloaded the same way we handle other non-OBO ontologies.

The ENERO Foundry is positioning itself as a coordination layer for interoperable energy-domain ontologies, with early ontologies including OEO, CEPO, MENO, MUNO, OTO, and CHIO. Semantic-SQL already has a partial oeo entry in src/semsql/builder/registry/ontologies.yaml, but the broader ENERO set is not yet modeled here in a consistent way.

Why

  • Energy ontologies are increasingly relevant for FAIR research data workflows.
  • ENERO is explicitly trying to make these ontologies interoperable, which aligns well with SemSQL's SQL view layer over OWL/RDF.
  • The repo already supports a curated registry of non-OBO ontologies, so ENERO onboarding fits the existing architecture.

Proposed scope

  • Audit candidate ENERO ontologies for stable release URLs, serialization, imports, and licensing.
  • Decide which ontologies should be added to src/semsql/builder/registry/ontologies.yaml.
  • Add registry entries, prefixmaps, and any necessary build_command overrides.
  • Validate that each selected ontology can be turned into a working SemSQL SQLite build.
  • Add focused tests or documented smoke-test commands for the new entries.
  • Update user-facing docs so the new ontology IDs are discoverable.

Candidate ontologies

  • oeo (already present, likely needs validation/refresh)
  • cepo
  • meno
  • muno
  • oto
  • chio

Open questions

  • Which ENERO ontologies publish stable machine-readable release artifacts today?
  • Do any require non-default preprocessing before rdftab / relation-graph?
  • Should we stage this as oeo hardening first, then add the rest incrementally?
  • Are there any energy-adjacent artifacts we should explicitly exclude because they are not OWL reference ontologies in the SemSQL sense?

Acceptance criteria

  • At least one additional ENERO ontology beyond oeo is integrated end-to-end in the registry.
  • The oeo entry is verified or corrected against the current upstream release layout.
  • New entries are documented and reproducible from a clean checkout.
主要语言
Python
星标
70
派生
7
平均合并
4 小时 18 分钟
30 天内合并 PR
1

环境准备

  • 提供 Dockerfile 或 Docker Compose 文件
  • 没有 Pull Request 模板
  • 阅读贡献指南

从这里开始

  1. 先读完整个 Issue,再读项目的贡献指南。
  2. 在 Issue 下留言说明你要接手 —— 这能避免两个人做同样的事。
  3. Fork 仓库,在一个分支上完成修改。
  4. 提交 Pull Request,并在描述里引用这个 Issue 编号。

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