Replace SNOMED CT structure (S node) xrefs with entire (E node) xrefs
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調査の方向性
The changes are SCTID xref lines in uberon.obo, one per affected Uberon term, so start by finding those terms there. Replace each listed S-node code with its E-node code, remove the six redundant S-node xrefs, and set aside the nine curator-judgment cases for a maintainer. Done means the replacements are applied, the file still validates, and the remaining mismatches are listed for review.
索引モデルが issue の本文から書いたものです。
説明
Summary
About 690 Uberon terms have an SCTID xref to a SNOMED CT structure concept (the S node of SNOMED's Structure-Entire-Part model) rather than the entire concept (E node). Most Uberon SCTID xrefs (about 3,000) point at E nodes, and @cmungall explained in #3287 why that's the right choice:
I think the E node is the correct one, since the uberon class represents the entity. More importantly, equivalence axioms can be made between E nodes without incoherency.
This issue proposes replacing the S-node xrefs with the corresponding E-node xrefs, so that Uberon's SNOMED mappings are consistent.
How the list was made
- Started from the SCTID xrefs in
uberon.obo(releases/2026-10-01), excluding obsolete terms. - Classified each target code using SNOMED CT's own
has_entire_anatomy_structurerelationship (active relationships only, from the UMLS 2026AA release of SNOMEDCT_US). A code is an S node if it has an entire partner via that relationship. - For each S-node xref, proposed the single E node SNOMED links it to. Every S node here has exactly one E partner, so nothing was chosen by hand or by name matching.
This gives three groups:
- 675 xrefs to replace (S node → its E node). Table below.
- 6 xrefs to remove: the Uberon term already xrefs the E node as well as the S node.
- 9 xrefs that need a curator's judgment: the E node is already xref'd by a different Uberon term, usually the parent class (e.g. regional part of nervous system has the S node for nervous system, and nervous system has the E node). These are probably intentional or need a different target, so I haven't proposed a change.
Why it matters downstream
We use Uberon's SCTID xrefs in Babel (the Biomedical Data Translator's identifier normalization) to join Uberon terms with UMLS concepts. When the xref points at the S node, the Uberon term doesn't join the UMLS concept for the E node, and we end up with duplicate concepts. We don't want to treat S and E as equivalent on our side, for the reason given in #3287.
I'm happy to provide this as a TSV or SSSOM file, or open a PR, if that would be easier.
Xrefs to remove (Uberon term already xrefs the E node)
| Uberon term | Remove (S node) | Keep (E node) |
|---|---|---|
| UBERON:0000332 yellow bone marrow | SCTID:5023006 Structure of yellow bone marrow | SCTID:328639002 All yellow bone marrow |
| UBERON:0000361 red bone marrow | SCTID:75330005 Structure of red bone marrow | SCTID:328538003 All red bone marrow |
| UBERON:0001252 adventitia of ureter | SCTID:47879001 Structure of adventitia of ureter | SCTID:392273001 Entire adventitia of ureter |
| UBERON:0004410 distal epiphysis of fibula | SCTID:129111008 Structure of distal fibular epiphysis | SCTID:280018004 Entire distal fibular epiphysis |
| UBERON:0005396 carotid artery segment | SCTID:69105007 Carotid artery structure | SCTID:362040006 Entire carotid artery |
| UBERON:0007763 cerebellum vermis culmen | SCTID:89649002 Structure of culmen | SCTID:279384001 Entire culmen |
Needs curator judgment (E node already xref'd by another Uberon term)
| Uberon term | Current (S node) | E node | E node already on |
|---|---|---|---|
| UBERON:0000064 organ part | SCTID:113343008 Body organ structure | SCTID:272625005 Entire body organ | UBERON:0000062 |
| UBERON:0000073 regional part of nervous system | SCTID:25087005 Structure of nervous system | SCTID:278196006 Entire nervous system | UBERON:0001016 |
| UBERON:0002050 embryonic structure | SCTID:667009 Embryonic structure | SCTID:57991002 Entire embryo | UBERON:0000922 |
| UBERON:0003864 middle phalanx of manus | SCTID:113223004 Structure of middle phalanx of middle finger | SCTID:263408007 Entire middle phalanx of middle finger | UBERON:0004321 |
| UBERON:0008246 pyloric stomach | SCTID:280119005 Pyloric structure of stomach | SCTID:362143006 Entire pylorus | UBERON:0001166 |
| UBERON:0009569 subdivision of trunk | SCTID:22943007 Trunk structure | SCTID:262225004 Entire trunk | UBERON:0002100 |
| UBERON:0009753 adrenal gland cortex zone | SCTID:68594002 Adrenal cortex structure | SCTID:362584002 Entire adrenal cortex | UBERON:0001235 |
| UBERON:0010305 subdivision of conjunctiva | SCTID:29445007 Conjunctival structure | SCTID:181161008 Entire conjunctiva | UBERON:0001811 |
| UBERON:0036268 pelvic vein | SCTID:13152008 Structure of vein of pelvic region | SCTID:281481002 Entire vein of pelvic region | UBERON:0005610 |
675 xrefs to replace (S node → E node)
| Uberon term | Current SCTID (S node) | Proposed SCTID (E node) |
|---|---|---|
| UBERON:0000009 submucosa | 68439008 | 727181003 |
| UBERON:0000014 zone of skin | 20795001 | 244066003 |
| UBERON:0000030 lamina propria | 298225002 | 729607008 |
| UBERON:0000084 ureteric bud | 361528000 | 730486005 |
| UBERON:0000085 morula | 361474003 | 731028006 |
| UBERON:0000087 inner cell mass | 361456007 | 730425006 |
| UBERON:0000090 blastocele | 361455006 | 730424005 |
| UBERON:0000118 lung bud | 361427007 | 730398001 |
| UBERON:0000123 endoneurium | 15931004 | 726875001 |
| UBERON:0000124 epineurium | 64482002 | 727158000 |
| UBERON:0000127 facial nucleus | 280166009 | 729257007 |
| UBERON:0000130 transverse foramen | 280735005 | 729498002 |
| UBERON:0000161 orifice | 91837002 | 727328000 |
| UBERON:0000164 primitive urogenital sinus | 50961009 | 727073001 |
| UBERON:0000200 gyrus | 279165009 | 731130006 |
| UBERON:0000219 vertebral foramen of atlas | 281228008 | 729554004 |
| UBERON:0000331 ileal mucosa | 85458007 | 362152002 |
| UBERON:0000362 renal medulla | 30737000 | 362212006 |
| UBERON:0000365 urothelium | 30117005 | 726947002 |
| UBERON:0000365 urothelium | 57789003 | 727116003 |
| UBERON:0000379 tracheal mucosa | 660006 | 726085001 |
| UBERON:0000397 colonic epithelium | 42978003 | 727024005 |
| UBERON:0000400 jejunal epithelium | 57300004 | 727111008 |
| UBERON:0000410 bronchial mucosa | 30802009 | 726955009 |
| UBERON:0000444 lymphoid follicle | 64626006 | 727160003 |
| UBERON:0000459 uterine wall | 245485002 | 731119008 |
| UBERON:0000478 extraembryonic structure | 314908006 | 732106006 |
| UBERON:0000483 epithelium | 31610004 | 726961007 |
| UBERON:0000485 simple columnar epithelium | 32210007 | 726962000 |
| UBERON:0000486 multilaminar epithelium | 309044005 | 729903009 |
| UBERON:0000490 unilaminar epithelium | 309043004 | 731023002 |
| UBERON:0000929 pharyngeal branch of vagus nerve | 280298006 | 729322007 |
| UBERON:0000935 anterior commissure | 279313001 | 728929004 |
| UBERON:0000959 optic chiasma | 244453006 | 727986007 |
| UBERON:0000980 trochanter | 182047004 | 727713002 |
| UBERON:0001013 adipose tissue | 55603005 | 727103003 |
| UBERON:0001033 gustatory system | 423940004 | 731379009 |
| UBERON:0001063 flocculus | 279368002 | 728942004 |
| UBERON:0001073 ileocecal junction | 264021000 | 728632003 |
| UBERON:0001113 lobe of liver | 245378000 | 728286003 |
| UBERON:0001131 vertebral foramen | 280734009 | 729497007 |
| UBERON:0001134 skeletal muscle tissue | 426215008 | 730700001 |
| UBERON:0001140 renal vein | 116358006 | 727415008 |
| UBERON:0001193 hepatic artery | 76015000 | 727223007 |
| UBERON:0001200 submucosa of stomach | 52459002 | 727082007 |
| UBERON:0001201 serosa of stomach | 1353004 | 726090003 |
| UBERON:0001203 muscularis mucosae of stomach | 64551004 | 727159008 |
| UBERON:0001205 submucosa of small intestine | 691000 | 726094007 |
| UBERON:0001206 serosa of small intestine | 8266009 | 726025004 |
| UBERON:0001210 muscularis mucosae of small intestine | 36401004 | 726987007 |
| UBERON:0001213 intestinal villus | 23230007 | 726908004 |
| UBERON:0001232 collecting duct of renal tubule | 28202009 | 726936009 |
| UBERON:0001238 lamina propria of small intestine | 63588008 | 727154003 |
| UBERON:0001241 crypt of Lieberkuhn of small intestine | 52688008 | 727084008 |
| UBERON:0001246 interlobular bile duct | 83488001 | 731093007 |
| UBERON:0001249 spleen lymphoid follicle | 35845000 | 726983006 |
| UBERON:0001250 red pulp of spleen | 27579002 | 726929008 |
| UBERON:0001253 lamina propria of ureter | 2771005 | 726095008 |
| UBERON:0001260 serosa of urinary bladder | 5868002 | 726034009 |
| UBERON:0001265 trabecula of spleen | 61987002 | 727142003 |
| UBERON:0001276 epithelium of stomach | 64977002 | 727163001 |
| UBERON:0001282 intralobular bile duct | 227002 | 730807009 |
| UBERON:0001331 skin of penis | 35900000 | 361709005 |
| UBERON:0001348 brown adipose tissue | 15965003 | 726876000 |
| UBERON:0001362 perineal vein | 312507009 | 729937001 |
| UBERON:0001384 primary motor cortex | 11931008 | 726849000 |
| UBERON:0001435 carpal bone | 83936004 | 1148428005 |
| UBERON:0001471 skin of prepuce of penis | 39059001 | 727000002 |
| UBERON:0001498 muscle of pes | 67240005 | 265807005 |
| UBERON:0001500 muscle of manus | 110540008 | 367633004 |
| UBERON:0001590 pericardiacophrenic vein | 361626007 | 730529002 |
| UBERON:0001606 muscle of iris | 280888007 | 729514001 |
| UBERON:0001630 muscle organ | 71616004 | 731986005 |
| UBERON:0001672 anterior cerebral vein | 55155007 | 731074005 |
| UBERON:0001701 glossopharyngeal ganglion | 244451008 | 727984005 |
| UBERON:0001721 inferior vestibular nucleus | 280175006 | 729260000 |
| UBERON:0001725 cranial synchondrosis | 314228003 | 730039003 |
| UBERON:0001730 extrinsic ligament of larynx | 279550004 | 729031002 |
| UBERON:0001743 ligament of larynx | 279508004 | 729008002 |
| UBERON:0001744 lymphoid tissue | 181768009 | 727659009 |
| UBERON:0001747 parenchyma of thyroid gland | 371402001 | 731258007 |
| UBERON:0001781 layer of retina | 280657006 | 729479004 |
| UBERON:0001794 inner limiting layer of retina | 280677004 | 729485006 |
| UBERON:0001810 nerve plexus | 122455009 | 609394009 |
| UBERON:0001850 lacrimal drainage system | 280426002 | 419221005 |
| UBERON:0001882 nucleus accumbens | 427667007 | 1186704001 |
| UBERON:0001887 internal capsule of telencephalon | 85637007 | 279217003 |
| UBERON:0001902 epithelium of small intestine | 45480009 | 727033007 |
| UBERON:0001925 ventral lateral nucleus of thalamus | 279146001 | 728904005 |
| UBERON:0001941 lateral habenular nucleus | 361538005 | 1186707008 |
| UBERON:0001944 pretectal region | 416333003 | 730659000 |
| UBERON:0001957 submucosa of bronchus | 85546005 | 727271007 |
| UBERON:0001978 parenchyma of pancreas | 371401008 | 731257002 |
| UBERON:0001983 crypt of Lieberkuhn | 118652008 | 727433002 |
| UBERON:0001986 endothelium | 27168002 | 726924003 |
| UBERON:0001991 cervical ganglion | 181100007 | 727594009 |
| UBERON:0001994 hyaline cartilage tissue | 39298000 | 727004006 |
| UBERON:0001995 fibrocartilage | 91685003 | 727319001 |
| UBERON:0001997 olfactory epithelium | 37623003 | 726994005 |
| UBERON:0002008 cardiac nerve plexus | 280511002 | 729406005 |
| UBERON:0002009 pulmonary nerve plexus | 280512009 | 729407001 |
| UBERON:0002028 hindbrain | 303456008 | 732052001 |
| UBERON:0002053 zona glomerulosa of adrenal gland | 21476003 | 726897004 |
| UBERON:0002054 zona fasciculata of adrenal gland | 56069004 | 727104009 |
| UBERON:0002055 zona reticularis of adrenal gland | 47325000 | 727048001 |
| UBERON:0002066 umbilical vein | 367567000 | 731247003 |
| UBERON:0002132 dentate nucleus | 279221005 | 728909000 |
| UBERON:0002133 atrioventricular valve | 11124005 | 725604006 |
| UBERON:0002141 parvocellular oculomotor nucleus | 62088007 | 730831004 |
| UBERON:0002144 peripeduncular nucleus | 25949000 | 726922004 |
| UBERON:0002153 fastigial nucleus | 279224002 | 728910005 |
| UBERON:0002202 submucosa of trachea | 4419000 | 726071006 |
| UBERON:0002203 vasculature of eye | 123846009 | 731110007 |
| UBERON:0002222 perichondrium | 11881003 | 726848008 |
| UBERON:0002342 neural crest | 361462002 | 730427003 |
| UBERON:0002371 bone marrow | 421320006 | 731308002 |
| UBERON:0002385 muscle tissue | 91727004 | 727320007 |
| UBERON:0002418 cartilage tissue | 309312004 | 729906001 |
| UBERON:0002421 hippocampal formation | 422867004 | 731340003 |
| UBERON:0002447 palatine gland | 13604002 | 726861008 |
| UBERON:0002457 intersomitic artery | 360401001 | 732113006 |
| UBERON:0002458 spinal artery | 244228006 | 727913005 |
| UBERON:0002459 inferior palpebral vein | 422559003 | 731323007 |
| UBERON:0002464 nerve trunk | 281248001 | 731743003 |
| UBERON:0002511 trabecula carnea | 118755002 | 727434008 |
| UBERON:0002515 periosteum | 33840008 | 726973007 |
| UBERON:0002521 elastic tissue | 27197004 | 726925002 |
| UBERON:0002522 tunica media | 61695000 | 727140006 |
| UBERON:0002523 tunica intima | 87483006 | 727284003 |
| UBERON:0002564 lateral orbital gyrus | 279195001 | 1359915006 |
| UBERON:0002569 transverse temporal sulcus | 42387003 | 727021002 |
| UBERON:0002570 medial orbital gyrus | 279194002 | 1359914005 |
| UBERON:0002575 posterior orbital gyrus | 279197009 | 1359917003 |
| UBERON:0002586 calcarine sulcus | 279355005 | 730953001 |
| UBERON:0002592 juxtarestiform body | 110687007 | 730845005 |
| UBERON:0002600 limbic lobe | 279215006 | 728907003 |
| UBERON:0002606 neuropil | 67146008 | 730833001 |
| UBERON:0002616 regional part of brain | 384763002 | 730597007 |
| UBERON:0002633 motor nucleus of trigeminal nerve | 38390003 | 726998008 |
| UBERON:0002656 periamygdaloid area | 279214005 | 728906007 |
| UBERON:0002658 medial lemniscus of midbrain | 361568001 | 730501000 |
| UBERON:0002735 transverse pontine fibers | 79836003 | 727246009 |
| UBERON:0002742 lamina of septum pellucidum | 12164006 | 726850000 |
| UBERON:0002761 inferior frontal sulcus | 279343004 | 728937007 |
| UBERON:0002779 lateral superior olivary nucleus | 360477003 | 730188000 |
| UBERON:0002815 horizontal fissure of cerebellum | 314173004 | 730029009 |
| UBERON:0002817 secondary fissure of cerebellum | 314169002 | 730026002 |
| UBERON:0002818 posterolateral fissure of cerebellum | 314172009 | 730028001 |
| UBERON:0002819 apex of cochlea | 279776002 | 730955008 |
| UBERON:0002819 apex of cochlea | 279777006 | 729123009 |
| UBERON:0002834 cervical dorsal root ganglion | 278325008 | 1286980004 |
| UBERON:0002835 thoracic dorsal root ganglion | 278326009 | 1287004002 |
| UBERON:0002836 lumbar dorsal root ganglion | 278327000 | 1286989003 |
| UBERON:0002837 sacral dorsal root ganglion | 278328005 | 1286998000 |
| UBERON:0002870 dorsal motor nucleus of vagus nerve | 52884007 | 727085009 |
| UBERON:0002871 hypoglossal nucleus | 47361005 | 727049009 |
| UBERON:0002912 marginal sulcus | 279351001 | 728940007 |
| UBERON:0002920 callosal sulcus | 279349000 | 728939005 |
| UBERON:0002925 trigeminal nucleus | 280164007 | 729256003 |
| UBERON:0002930 tectopontine tract | 3301002 | 730810002 |
| UBERON:0002944 spinothalamic tract of medulla | 360570003 | 730217007 |
| UBERON:0002961 archicortex | 423918008 | 731377006 |
| UBERON:0003060 pronephric duct | 361406002 | 730379003 |
| UBERON:0003062 primitive knot | 361464001 | 730429000 |
| UBERON:0003064 intermediate mesoderm | 361476001 | 730439006 |
| UBERON:0003077 paraxial mesoderm | 361475002 | 730438003 |
| UBERON:0003081 lateral plate mesoderm | 361477005 | 730440008 |
| UBERON:0003220 metanephric mesenchyme | 361529008 | 730487001 |
| UBERON:0003329 submucosa of anal canal | 7892006 | 731044002 |
| UBERON:0003330 submucosa of rectum | 71683001 | 727202001 |
| UBERON:0003331 submucosa of colon | 61647009 | 727137006 |
| UBERON:0003332 submucosa of duodenum | 76519004 | 727226004 |
| UBERON:0003333 submucosa of jejunum | 70192009 | 727192002 |
| UBERON:0003335 serosa of colon | 90132000 | 727306000 |
| UBERON:0003336 serosa of duodenum | 1236009 | 726089007 |
| UBERON:0003396 mesentery of colon | 245457004 | 728297003 |
| UBERON:0003435 pedal digit nerve | 300056004 | 729613004 |
| UBERON:0003447 digit nerve of manus | 181015006 | 727553001 |
| UBERON:0003468 ureteric segment of renal artery | 65376008 | 727167000 |
| UBERON:0003477 vein of upper lip | 422755007 | 731334005 |
| UBERON:0003478 vein of lower lip | 422955002 | 731346009 |
| UBERON:0003480 vein of clitoris | 360819004 | 731198001 |
| UBERON:0003535 vagus X nerve trunk | 280308004 | 729325009 |
| UBERON:0003618 aorta tunica media | 48467007 | 727057007 |
| UBERON:0003657 limb joint | 312683002 | 731829004 |
| UBERON:0003672 dentition | 245543004 | 728315009 |
| UBERON:0003714 neural tissue | 91728009 | 110657001 |
| UBERON:0003715 splanchnic nerve | 264198001 | 728669000 |
| UBERON:0003716 recurrent laryngeal nerve | 24227007 | 731050007 |
| UBERON:0003718 muscle spindle | 12945004 | 726856006 |
| UBERON:0003719 Pacinian corpuscle | 37419002 | 730827005 |
| UBERON:0003832 esophagus muscle | 360961009 | 726810003 |
| UBERON:0003848 gonadal vein | 278192008 | 728815004 |
| UBERON:0003910 splenic sinusoid | 9081000 | 726028002 |
| UBERON:0003922 pancreatic epithelial bud | 360398004 | 730163008 |
| UBERON:0003923 dorsal pancreatic bud | 361435005 | 730406008 |
| UBERON:0003924 ventral pancreatic bud | 361437002 | 730408009 |
| UBERON:0003976 saccule duct | 279829002 | 730959002 |
| UBERON:0003977 utricle duct | 279819009 | 730957000 |
| UBERON:0003987 Hassall's corpuscle | 34223001 | 730826001 |
| UBERON:0003991 fourth ventricle median aperture | 279449001 | 728972005 |
| UBERON:0003992 fourth ventricle lateral aperture | 63426007 | 727152004 |
| UBERON:0004043 semicircular canal ampulla | 279759001 | 729115007 |
| UBERON:0004066 frontonasal prominence | 361486000 | 730449009 |
| UBERON:0004074 cerebellum vermis lobule I | 279380005 | 728944003 |
| UBERON:0004074 cerebellum vermis lobule I | 77232000 | 727233004 |
| UBERON:0004100 renal collecting system | 279371005 | 732008009 |
| UBERON:0004130 cerebellar layer | 360478008 | 730189008 |
| UBERON:0004132 trigeminal sensory nucleus | 280170001 | 729258002 |
| UBERON:0004153 ventricular septum intermedium | 361468003 | 730433007 |
| UBERON:0004170 spinal cord ventral commissure | 424149007 | 731383009 |
| UBERON:0004319 distal phalanx of pedal digit 5 | 10770001 | 731046000 |
| UBERON:0004341 primitive streak | 361438007 | 730409001 |
| UBERON:0004382 epiphysis of humerus | 313054009 | 730007005 |
| UBERON:0004383 epiphysis of tibia | 314626006 | 730115005 |
| UBERON:0004384 epiphysis of femur | 314625005 | 730114009 |
| UBERON:0004385 epiphysis of radius | 313055005 | 730008000 |
| UBERON:0004386 epiphysis of ulna | 313056006 | 730009008 |
| UBERON:0004387 epiphysis of phalanx of manus | 314620000 | 730112008 |
| UBERON:0004389 epiphysis of metatarsal bone | 313057002 | 730010003 |
| UBERON:0004390 epiphysis of metacarpal bone | 314907001 | 730154006 |
| UBERON:0004409 distal epiphysis of phalanx of manus | 272707006 | 728741000 |
| UBERON:0004411 proximal epiphysis of humerus | 280028008 | 729211005 |
| UBERON:0004414 proximal epiphysis of phalanx of manus | 272704004 | 728738009 |
| UBERON:0004415 proximal epiphysis of metatarsal bone | 119545008 | 272719003 |
| UBERON:0004419 proximal epiphysis of phalanx of manual digit 3 | 181997000 | 727700008 |
| UBERON:0004432 proximal epiphysis of distal phalanx of manual digit 2 | 263445001 | 728592005 |
| UBERON:0004433 proximal epiphysis of distal phalanx of manual digit 3 | 263446000 | 728593000 |
| UBERON:0004434 proximal epiphysis of distal phalanx of manual digit 4 | 263447009 | 728594006 |
| UBERON:0004435 proximal epiphysis of distal phalanx of manual digit 5 | 263448004 | 728595007 |
| UBERON:0004436 proximal epiphysis of middle phalanx of manual digit 2 | 263428006 | 728576000 |
| UBERON:0004437 proximal epiphysis of middle phalanx of manual digit 3 | 263429003 | 728577009 |
| UBERON:0004438 proximal epiphysis of middle phalanx of manual digit 4 | 263430008 | 728578004 |
| UBERON:0004439 proximal epiphysis of middle phalanx of manual digit 5 | 263431007 | 728579007 |
| UBERON:0004440 proximal epiphysis of proximal phalanx of manual digit 2 | 263412001 | 728560009 |
| UBERON:0004441 proximal epiphysis of proximal phalanx of manual digit 3 | 263413006 | 728561008 |
| UBERON:0004442 proximal epiphysis of proximal phalanx of manual digit 4 | 263414000 | 728562001 |
| UBERON:0004443 proximal epiphysis of proximal phalanx of manual digit 5 | 263415004 | 728563006 |
| UBERON:0004444 proximal epiphysis of distal phalanx of manual digit 1 | 182008001 | 727708001 |
| UBERON:0004445 proximal epiphysis of proximal phalanx of manual digit 1 | 181993001 | 727696000 |
| UBERON:0004446 epiphysis of phalanx | 280033007 | 729213008 |
| UBERON:0004448 distal epiphysis of phalanx | 110520001 | 727351000 |
| UBERON:0004545 external capsule of telencephalon | 279300007 | 728926006 |
| UBERON:0004637 otic capsule | 361515007 | 730475008 |
| UBERON:0004645 urinary bladder urothelium | 25631003 | 726919001 |
| UBERON:0004648 esophagus muscularis mucosa | 47720007 | 726780004 |
| UBERON:0004654 temporal process of zygomatic bone | 122772003 | 727446007 |
| UBERON:0004658 mandible head | 51354009 | 727075008 |
| UBERON:0004664 aorta tunica adventitia | 24996002 | 726918009 |
| UBERON:0004670 ependyma | 12766003 | 726854009 |
| UBERON:0004673 trigeminal nerve root | 280185007 | 729263003 |
| UBERON:0004674 facial nerve root | 280186008 | 729264009 |
| UBERON:0004681 vestibular system | 361533001 | 731242009 |
| UBERON:0004706 bulbus cordis | 361525002 | 731030008 |
| UBERON:0004722 deep cervical lymph node | 279145002 | 728903004 |
| UBERON:0004755 skeletal tissue | 309311006 | 729905002 |
| UBERON:0004786 gastrointestinal system mucosa | 410433007 | 731280005 |
| UBERON:0004858 cellular cartilage | 81997001 | 727252005 |
| UBERON:0004867 orbital cavity | 280541000 | 729423001 |
| UBERON:0004870 superficial cervical lymph node | 279144003 | 728902009 |
| UBERON:0004875 nephrogenic cord | 361405003 | 730378006 |
| UBERON:0004917 urethral sphincter | 277855007 | 728784004 |
| UBERON:0004918 internal urethral sphincter | 277856008 | 728785003 |
| UBERON:0004924 submucosa of pharynx | 19594009 | 726891003 |
| UBERON:0004925 submucosa of laryngopharynx | 47496006 | 727051008 |
| UBERON:0004928 submucosa of appendix | 86833001 | 727279009 |
| UBERON:0004943 submucosa of urinary bladder | 88384001 | 727288000 |
| UBERON:0004946 submucosa of ileum | 65374006 | 727166009 |
| UBERON:0004980 mucosa of ureter | 40476001 | 727013008 |
| UBERON:0005024 mucosa of soft palate | 245842003 | 728456008 |
| UBERON:0005039 mucosa of bronchiole | 10887006 | 725605007 |
| UBERON:0005042 inner epithelial layer of tympanic membrane | 36411006 | 726988002 |
| UBERON:0005046 mucosa of hard palate | 245841005 | 728455007 |
| UBERON:0005061 neural groove | 361463007 | 730428008 |
| UBERON:0005062 neural fold | 361461009 | 730426007 |
| UBERON:0005070 anterior neuropore | 361478000 | 730441007 |
| UBERON:0005071 posterior neuropore | 361479008 | 730442000 |
| UBERON:0005077 neuropore | 360408007 | 730165001 |
| UBERON:0005159 pyramid of medulla oblongata | 9535007 | 726839003 |
| UBERON:0005167 papillary duct | 110623009 | 727390001 |
| UBERON:0005169 interstitial tissue | 85293002 | 727269007 |
| UBERON:0005278 nail bed of finger | 244199003 | 727906005 |
| UBERON:0005279 nail bed of toe | 244200000 | 727907001 |
| UBERON:0005303 hypogastric nerve | 181061006 | 727579005 |
| UBERON:0005331 mesonephric renal vesicle | 361407006 | 730380000 |
| UBERON:0005351 paraflocculus | 51969002 | 727080004 |
| UBERON:0005360 inferior glossopharyngeal IX ganglion | 66031007 | 727170001 |
| UBERON:0005361 superior glossopharyngeal IX ganglion | 280362000 | 729364007 |
| UBERON:0005362 vagus X ganglion | 244452001 | 727985006 |
| UBERON:0005363 inferior vagus X ganglion | 14420006 | 726866003 |
| UBERON:0005364 superior vagus X ganglion | 280197008 | 729269004 |
| UBERON:0005412 optic fissure | 361508004 | 730468007 |
| UBERON:0005426 lens vesicle | 361510002 | 730470003 |
| UBERON:0005432 aortic sac | 361527005 | 730485009 |
| UBERON:0005455 interventricular groove | 277708006 | 728774000 |
| UBERON:0005460 left vitelline vein | 361446008 | 730417009 |
| UBERON:0005472 right vitelline vein | 361445007 | 730416000 |
| UBERON:0005479 superior mesenteric ganglion | 279276003 | 728921001 |
| UBERON:0005486 venous dural sinus | 54944003 | 727098000 |
| UBERON:0005600 crus commune | 279758009 | 729114006 |
| UBERON:0005601 dorsal mesocardium | 361454005 | 730423004 |
| UBERON:0005612 intercostal artery | 281134007 | 729546001 |
| UBERON:0005620 primary palate | 359541001 | 730156008 |
| UBERON:0005621 rhomboid | 277441005 | 728758005 |
| UBERON:0005669 peritoneal cavity mesothelium | 34073007 | 262511001 |
| UBERON:0005685 midgut dorsal mesentery | 361434009 | 730405007 |
| UBERON:0005734 tunica adventitia of blood vessel | 61066005 | 727133005 |
| UBERON:0005740 tunica intima of artery | 40022005 | 727010006 |
| UBERON:0005742 adventitia | 30180000 | 726948007 |
| UBERON:0005769 basement membrane of epithelium | 68989006 | 727186008 |
| UBERON:0005808 bone tissue of long bone | 425475006 | 730673009 |
| UBERON:0005810 cervical vertebra 1 anterior tubercle | 281224005 | 729551007 |
| UBERON:0005814 arch of atlas | 272708001 | 728742007 |
| UBERON:0005870 olfactory pit | 361485001 | 730448001 |
| UBERON:0005980 pectinate muscle | 277718001 | 728778002 |
| UBERON:0006134 nerve fiber | 88545005 | 726785009 |
| UBERON:0006136 unmyelinated nerve fiber | 46920005 | 726779002 |
| UBERON:0006211 buccopharyngeal membrane | 361412007 | 730383003 |
| UBERON:0006257 laryngotracheal groove | 361426003 | 730397006 |
| UBERON:0006271 orbital fissure | 280546005 | 729426009 |
| UBERON:0006275 pericardio-peritoneal canal | 361428002 | 730399009 |
| UBERON:0006279 pleuroperitoneal canal | 361413002 | 730384009 |
| UBERON:0006283 future cardiac ventricle | 361524003 | 730483002 |
| UBERON:0006284 early prosencephalic vesicle | 361480006 | 730443005 |
| UBERON:0006307 urogenital membrane | 172994001 | 727514005 |
| UBERON:0006311 chamber of eyeball | 280540004 | 729422006 |
| UBERON:0006325 laryngeal intrinsic ligament | 279557001 | 729034005 |
| UBERON:0006345 stapedial artery | 361518009 | 730478005 |
| UBERON:0006349 epigastric artery | 261400009 | 728516009 |
| UBERON:0006438 principal artery to hindlimb | 361443000 | 730414002 |
| UBERON:0006442 subhepatic recess | 36051002 | 726986003 |
| UBERON:0006447 L5 segment of lumbar spinal cord | 278775008 | 728841005 |
| UBERON:0006448 L1 segment of lumbar spinal cord | 278776009 | 728842003 |
| UBERON:0006449 L3 segment of lumbar spinal cord | 278778005 | 728844002 |
| UBERON:0006450 L2 segment of lumbar spinal cord | 278777000 | 728843008 |
| UBERON:0006451 L4 segment of lumbar spinal cord | 278779002 | 728845001 |
| UBERON:0006452 T4 segment of thoracic spinal cord | 278766006 | 728832000 |
| UBERON:0006453 T5 segment of thoracic spinal cord | 278767002 | 728833005 |
| UBERON:0006454 T6 segment of thoracic spinal cord | 278768007 | 728834004 |
| UBERON:0006455 T7 segment of thoracic spinal cord | 278769004 | 728835003 |
| UBERON:0006456 T8 segment of thoracic spinal cord | 278770003 | 728836002 |
| UBERON:0006457 T1 segment of thoracic spinal cord | 278762008 | 728829003 |
| UBERON:0006458 T2 segment of thoracic spinal cord | 278763003 | 728830008 |
| UBERON:0006459 T3 segment of thoracic spinal cord | 278764009 | 728831007 |
| UBERON:0006460 S1 segment of sacral spinal cord | 278780004 | 728846000 |
| UBERON:0006461 S2 segment of sacral spinal cord | 278781000 | 728847009 |
| UBERON:0006462 S3 segment of sacral spinal cord | 278782007 | 728848004 |
| UBERON:0006463 S4 segment of sacral spinal cord | 278783002 | 728849007 |
| UBERON:0006464 S5 segment of sacral spinal cord | 278784008 | 728850007 |
| UBERON:0006465 T9 segment of thoracic spinal cord | 278771004 | 728837006 |
| UBERON:0006466 T10 segment of thoracic spinal cord | 278772006 | 728838001 |
| UBERON:0006467 T11 segment of thoracic spinal cord | 278773001 | 728839009 |
| UBERON:0006468 T12 segment of thoracic spinal cord | 278774007 | 728840006 |
| UBERON:0006469 C1 segment of cervical spinal cord | 278754000 | 728821000 |
| UBERON:0006470 C8 segment of cervical spinal cord | 278761001 | 728828006 |
| UBERON:0006488 C3 segment of cervical spinal cord | 278756003 | 728823002 |
| UBERON:0006489 C2 segment of cervical spinal cord | 278755004 | 728822007 |
| UBERON:0006490 C4 segment of cervical spinal cord | 278757007 | 728824008 |
| UBERON:0006491 C5 segment of cervical spinal cord | 278758002 | 728825009 |
| UBERON:0006492 C6 segment of cervical spinal cord | 278759005 | 728826005 |
| UBERON:0006493 C7 segment of cervical spinal cord | 278760000 | 728827001 |
| UBERON:0006565 female urethral meatus | 279479008 | 728995001 |
| UBERON:0006568 hypothalamic nucleus | 279304003 | 728927002 |
| UBERON:0006574 pectinate line | 245445008 | 1336212006 |
| UBERON:0006608 corpus cavernosum clitoridis | 16657007 | 726880005 |
| UBERON:0006638 remnant of urachus | 89583000 | 727299003 |
| UBERON:0006651 appendix testis | 279601003 | 729051003 |
| UBERON:0006660 muscular coat | 86915006 | 727280007 |
| UBERON:0006664 greater palatine artery | 312163002 | 729927006 |
| UBERON:0006671 orbital fat pad | 363656009 | 732138001 |
| UBERON:0006676 muscularis mucosa | 370140002 | 730572008 |
| UBERON:0006686 spinal vein | 181376008 | 727612002 |
| UBERON:0006688 sublingual caruncle | 85139009 | 727265001 |
| UBERON:0006729 liver perisinusoidal space | 17779003 | 726886004 |
| UBERON:0006749 superior parathyroid gland | 245540001 | 728313002 |
| UBERON:0006755 inferior parathyroid gland | 245542009 | 728314008 |
| UBERON:0006770 apophysis | 65000005 | 727164007 |
| UBERON:0006804 reticular tissue | 57987007 | 727118002 |
| UBERON:0006812 mental foramen | 244686000 | 728071001 |
| UBERON:0006815 areolar connective tissue | 68477002 | 727182005 |
| UBERON:0006843 root of cranial nerve | 280161004 | 729255004 |
| UBERON:0006855 muscular coat of ureter | 3563003 | 726070007 |
| UBERON:0006914 squamous epithelium | 40118003 | 727011005 |
| UBERON:0006934 sensory epithelium | 309045006 | 729904003 |
| UBERON:0006956 buccal mucosa | 16811007 | 256682009 |
| UBERON:0007005 cardiogenic splanchnic mesoderm | 360387000 | 730161005 |
| UBERON:0007145 dome of diaphragm | 244940004 | 728084005 |
| UBERON:0007177 lamina propria of mucosa of colon | 113284008 | 727407005 |
| UBERON:0007178 muscularis mucosae of colon | 885000 | 726087009 |
| UBERON:0007188 mesothelium of serous pericardium | 67300002 | 727175006 |
| UBERON:0007239 tunica media of artery | 84300001 | 727261005 |
| UBERON:0007240 tunica adventitia of artery | 113261001 | 727406001 |
| UBERON:0007241 tunica adventitia of vein | 13202006 | 726857002 |
| UBERON:0007242 tunica intima of vein | 2436009 | 726091004 |
| UBERON:0007243 tunica media of vein | 42049001 | 727019007 |
| UBERON:0007252 intervertebral disk of cervical vertebra | 68818006 | 244571001 |
| UBERON:0007312 pudendal artery | 277968003 | 728807002 |
| UBERON:0007367 surface of tongue | 314870004 | 730149002 |
| UBERON:0007610 tibial artery | 181351007 | 727610005 |
| UBERON:0007619 limiting membrane of retina | 280667001 | 729480001 |
| UBERON:0007635 nucleus of medulla oblongata | 304943004 | 729762009 |
| UBERON:0007651 anatomical junction | 91833003 | 727326001 |
| UBERON:0007652 esophageal sphincter | 277765007 | 726799008 |
| UBERON:0007679 intersomitic vein | 361448009 | 730418004 |
| UBERON:0007703 spinothalamic tract | 280417000 | 729386008 |
| UBERON:0007799 mixed dentition | 245545006 | 728316005 |
| UBERON:0007838 spinal cord white commissure | 423957000 | 731380007 |
| UBERON:0007840 spinal cord dorsal white commissure | 424400007 | 731391000 |
| UBERON:0007846 dense regular connective tissue | 22560007 | 726906000 |
| UBERON:0008202 bone of hip region | 304907005 | 731787007 |
| UBERON:0008266 periodontal ligament | 245775004 | 728417002 |
| UBERON:0008267 left supracardinal vein | 361449001 | 730419007 |
| UBERON:0008281 tooth bud | 53301001 | 727087001 |
| UBERON:0008320 common penile artery | 282044005 | 731160001 |
| UBERON:0008338 plantar part of pes | 57999000 | 731075006 |
| UBERON:0008345 ileal epithelium | 47046000 | 727045003 |
| UBERON:0008346 duodenal epithelium | 66036002 | 727171002 |
| UBERON:0008427 transverse foramen of axis | 281221002 | 729550008 |
| UBERON:0008429 cervical vertebral foramen | 280833008 | 729500001 |
| UBERON:0008430 lumbar vertebral foramen | 280835001 | 729502009 |
| UBERON:0008432 thoracic vertebral foramen | 280834002 | 729501002 |
| UBERON:0008842 suspensory ligament of testis | 279592009 | 729048005 |
| UBERON:0008847 ovarian ligament | 279915004 | 729183006 |
| UBERON:0008857 stomach smooth muscle circular layer | 2746007 | 726093001 |
| UBERON:0008877 epidermal-dermal junction | 51025007 | 727074007 |
| UBERON:0008883 osteoid | 39365008 | 727005007 |
| UBERON:0008930 somatosensory cortex | 279252006 | 728915000 |
| UBERON:0008969 dental follicle | 110975002 | 727402004 |
| UBERON:0008977 pes anserinus of tibia | 360767004 | 730231007 |
| UBERON:0008987 renal parenchyma | 29704000 | 362213001 |
| UBERON:0008992 chorion frondosum | 37333001 | 257341007 |
| UBERON:0008993 habenular nucleus | 279303009 | 1186706004 |
| UBERON:0008995 nucleus of cerebellar nuclear complex | 279220006 | 728908008 |
| UBERON:0009000 ischial spine | 18074002 | 182042005 |
| UBERON:0009006 deep inguinal lymph node | 65266007 | 731080002 |
| UBERON:0009007 superficial inguinal lymph node | 113340006 | 245370007 |
| UBERON:0009009 carotid sinus nerve | 50624003 | 727072006 |
| UBERON:0009013 white fibrocartilage | 3008003 | 726063007 |
| UBERON:0009016 ciliary stroma | 280868008 | 729504005 |
| UBERON:0009024 adrenal gland X zone | 24306004 | 730822004 |
| UBERON:0009025 gastroepiploic artery | 261401008 | 728517000 |
| UBERON:0009026 iliac circumflex artery | 244327004 | 727933009 |
| UBERON:0009029 pudendal vein | 395225000 | 730603005 |
| UBERON:0009129 right atrium endocardium | 3194006 | 726828001 |
| UBERON:0009130 dorsal meso-duodenum | 361433003 | 730404006 |
| UBERON:0009133 pleuroperitoneal membrane | 361429005 | 730400002 |
| UBERON:0009138 right common cardinal vein | 361507009 | 730467002 |
| UBERON:0009139 right posterior cardinal vein | 361505001 | 730465005 |
| UBERON:0009140 right subcardinal vein | 361452009 | 730421002 |
| UBERON:0009471 dorsum of tongue | 66938003 | 362093007 |
| UBERON:0009552 distal segment of manual digit | 312543003 | 1259254002 |
| UBERON:0009646 lumbar sympathetic nerve trunk | 280534006 | 729420003 |
| UBERON:0009647 tympanic membrane epithelium | 70839004 | 727196004 |
| UBERON:0009661 midbrain nucleus | 279285003 | 728922008 |
| UBERON:0009668 ventral mesentery | 361430000 | 730401003 |
| UBERON:0009746 head fold of embryonic disc | 361453004 | 730422009 |
| UBERON:0009747 tail fold of embryonic disc | 361439004 | 730410006 |
| UBERON:0009758 abdominal ganglion | 280508003 | 729404008 |
| UBERON:0009769 left common cardinal vein | 361506000 | 730466006 |
| UBERON:0009772 right anterior cardinal vein | 361503008 | 730463003 |
| UBERON:0009859 endosteum | 57487002 | 727114000 |
| UBERON:0009916 wall of ureter | 279397004 | 728950008 |
| UBERON:0009973 ureterovesical junction | 261187001 | 728515008 |
| UBERON:0009980 condyle of femur | 304912006 | 729742001 |
| UBERON:0010020 tubotympanic recess epithelium | 361516008 | 730476009 |
| UBERON:0010034 copula linguae | 361424000 | 730395003 |
| UBERON:0010052 mucosa of dorsum of tongue | 245835003 | 728453000 |
| UBERON:0010057 hypopharyngeal eminence | 361420009 | 730391007 |
| UBERON:0010069 outer epithelial layer of tympanic membrane | 39725007 | 727009001 |
| UBERON:0010070 intermediate layer of tympanic membrane | 44692008 | 727031009 |
| UBERON:0010161 lumen of blood vessel | 91747007 | 727322004 |
| UBERON:0010260 umbilical blood vessel | 408728001 | 731279007 |
| UBERON:0010279 pericardial sinus | 314273005 | 730058007 |
| UBERON:0010287 motor root of facial nerve | 280191009 | 729266006 |
| UBERON:0010307 conjunctival fornix | 276831007 | 731125007 |
| UBERON:0010361 synostosis | 1216008 | 726088004 |
| UBERON:0010372 uncinate process of ethmoid | 306373001 | 729830000 |
| UBERON:0010389 pterygoid bone | 415639001 | 731289006 |
| UBERON:0010467 teres muscle | 277440006 | 728757000 |
| UBERON:0010912 subdivision of skeleton | 129140006 | 24201007 |
| UBERON:0010926 lateral thyrohyoid ligament | 279555009 | 729032009 |
| UBERON:0010938 muscle belly | 29823001 | 726946006 |
| UBERON:0010940 muscle of digastric group | 360772008 | 730233005 |
| UBERON:0010947 occipitalis | 21405000 | 368681009 |
| UBERON:0011078 endolymphatic space | 279856000 | 729157001 |
| UBERON:0011124 xiphisternal joint | 118923007 | 730848007 |
| UBERON:0011124 xiphisternal joint | 118924001 | 730849004 |
| UBERON:0011131 intermetacarpal joint | 303065007 | 729622003 |
| UBERON:0011289 pharyngobasilar fascia | 16675008 | 730818009 |
| UBERON:0011298 submucosa of fallopian tube | 245489008 | 728305003 |
| UBERON:0011316 nerve to stylohyoid from facial nerve | 89590005 | 727300006 |
| UBERON:0011317 nerve to stylopharyngeus from glossopharyngeal nerve | 280294008 | 729320004 |
| UBERON:0011320 ligament of temporomandibular joint | 127861009 | 727459004 |
| UBERON:0011322 mylohyoid nerve | 280269007 | 729304009 |
| UBERON:0011370 transverse process of atlas | 181895009 | 727681004 |
| UBERON:0011392 blood vessel internal elastic membrane | 86405007 | 727275003 |
| UBERON:0011532 female pubococcygeus muscle | 208282000 | 730858006 |
| UBERON:0011565 lumen of gastrointestinal system | 432899004 | 731431003 |
| UBERON:0011624 superior horn of thyroid cartilage | 279520007 | 729014009 |
| UBERON:0011625 inferior horn of thyroid cartilage | 279521006 | 729015005 |
| UBERON:0011766 left recurrent laryngeal nerve | 280300006 | 1268452009 |
| UBERON:0011767 right recurrent laryngeal nerve | 280299003 | 1268453004 |
| UBERON:0011824 fibrous connective tissue | 363130003 | 730570000 |
| UBERON:0011847 acinus of parotid gland | 46926004 | 727043005 |
| UBERON:0011895 endomysium | 91739007 | 727321006 |
| UBERON:0011900 perimysium | 63406008 | 727151006 |
| UBERON:0011970 talofibular ligament | 244649001 | 724043003 |
| UBERON:0011973 epiphysis of phalanx of pes | 314621001 | 730113003 |
| UBERON:0011974 epiphysis of proximal phalanx of pes | 280047006 | 729224005 |
| UBERON:0011975 epiphysis of middle phalanx of pes | 280048001 | 729225006 |
| UBERON:0011976 epiphysis of distal phalanx of pes | 280049009 | 729226007 |
| UBERON:0011977 epiphysis of proximal phalanx of manus | 280044004 | 729221002 |
| UBERON:0011978 epiphysis of middle phalanx of manus | 280045003 | 729222009 |
| UBERON:0011979 epiphysis of distal phalanx of manus | 280046002 | 729223004 |
| UBERON:0012110 frontal process of zygomatic bone | 116353002 | 727413001 |
| UBERON:0012117 lumen of nutrient foramen | 29288001 | 726941001 |
| UBERON:0012167 buccal fat pad | 25930004 | 726921006 |
| UBERON:0012175 acoustico-facial VII-VIII ganglion complex | 361514006 | 730474007 |
| UBERON:0012241 male urethral meatus | 279478000 | 728994002 |
| UBERON:0012297 male urethral crest | 279470007 | 728989002 |
| UBERON:0012298 female urethral crest | 279471006 | 728990006 |
| UBERON:0012314 embryonic facial prominence | 89066004 | 362861000 |
| UBERON:0012374 subserosal plexus | 110699000 | 727399000 |
| UBERON:0012375 subserosa | 2255006 | 726041003 |
| UBERON:0012376 retromolar triangle | 245830008 | 728448005 |
| UBERON:0012401 small intestine smooth muscle circular layer | 54658003 | 727095002 |
| UBERON:0012402 small intestine smooth muscle longitudinal layer | 59150006 | 727127001 |
| UBERON:0012450 Meissner's corpuscle | 41421000 | 730828000 |
| UBERON:0012451 sensory receptor | 70402007 | 731985009 |
| UBERON:0012456 Merkel nerve ending | 9317004 | 730813000 |
| UBERON:0012457 Ruffini nerve ending | 53140000 | 730830003 |
| UBERON:0012477 dorsal part of neck | 304036007 | 362654002 |
| UBERON:0012494 muscularis mucosae of duodenum | 37457002 | 726993004 |
| UBERON:0012497 muscularis mucosae of rectum | 53420003 | 727088006 |
| UBERON:0012498 serosa of appendix | 22488003 | 726905001 |
| UBERON:0012504 adventitia of esophagus | 85950006 | 726784008 |
| UBERON:0012650 gastroduodenal junction | 264014000 | 728631005 |
| UBERON:0013118 sulcus of brain | 279337001 | 728936003 |
| UBERON:0013124 left posterior cardinal vein | 361504002 | 730464009 |
| UBERON:0013125 left subcardinal vein | 361451002 | 730420001 |
| UBERON:0013142 soleal vein | 397427005 | 730617001 |
| UBERON:0013148 early midbrain vesicle | 361481005 | 730444004 |
| UBERON:0013149 hindbrain vesicle | 361482003 | 730445003 |
| UBERON:0013150 future brain vesicle | 360409004 | 730166000 |
| UBERON:0013224 Ciaccio's gland | 278361003 | 728817007 |
| UBERON:0013227 crypt of Henle | 278362005 | 728818002 |
| UBERON:0013241 embryonic urethral groove | 361531004 | 730489003 |
| UBERON:0013485 crypt of Lieberkuhn of colon | 19447003 | 726890002 |
| UBERON:0013486 crypt of Lieberkuhn of appendix | 21512007 | 726898009 |
| UBERON:0013529 Brodmann area | 384717008 | 731034004 |
| UBERON:0013647 lateral pterygoid nerve | 48852002 | 727060000 |
| UBERON:0013682 peripheral region of retina | 264141008 | 728657008 |
| UBERON:0013685 foramen of skull | 276742007 | 728745009 |
| UBERON:0013754 integumentary system layer | 314820002 | 730140003 |
| UBERON:0013766 epicanthal fold | 74824007 | 731703008 |
| UBERON:0013768 great vessel of heart | 304066000 | 729723000 |
| UBERON:0014380 flexor digitorum brevis muscle | 79490000 | 727244007 |
| UBERON:0014430 sciatic notch | 360956007 | 730326008 |
| UBERON:0014444 pubic ramus | 182026003 | 727712007 |
| UBERON:0014450 pretectal nucleus | 416164009 | 730655006 |
| UBERON:0014473 precentral fissure of cerebellum | 18716004 | 726889006 |
| UBERON:0014541 thoracic division of spinal cord central canal | 71118002 | 727197008 |
| UBERON:0014542 cervical division of cord spinal central canal | 280403009 | 729382005 |
| UBERON:0014543 lumbar division of spinal cord central canal | 280406001 | 729384006 |
| UBERON:0014615 accessory nerve root | 280187004 | 729265005 |
| UBERON:0014626 base of cochlear canal | 279778001 | 729124003 |
| UBERON:0014628 vestibular fissure of the cochlear canal | 279772000 | 729121006 |
| UBERON:0014630 ventral gray commissure of spinal cord | 88806005 | 727292007 |
| UBERON:0014631 dorsal gray commissure of spinal cord | 21169000 | 726896008 |
| UBERON:0014731 haversian canal | 3336003 | 730811003 |
| UBERON:0014881 distal epiphysis of distal phalanx of manual digit 1 | 182011000 | 727711000 |
| UBERON:0014882 distal epiphysis of distal phalanx of manual digit 2 | 263457005 | 728604007 |
| UBERON:0014883 distal epiphysis of distal phalanx of manual digit 3 | 263458000 | 728605008 |
| UBERON:0014884 distal epiphysis of distal phalanx of manual digit 4 | 263459008 | 728606009 |
| UBERON:0014885 distal epiphysis of distal phalanx of manual digit 5 | 263460003 | 728607000 |
| UBERON:0014886 distal epiphysis of distal phalanx of manual digit | 182006002 | 727707006 |
| UBERON:0014891 brainstem white matter | 360442003 | 730171007 |
| UBERON:0014931 periungual skin | 280418005 | 729387004 |
| UBERON:0014932 periventricular white matter | 37065005 | 726992009 |
| UBERON:0014933 periventricular gray matter | 89530008 | 727298006 |
| UBERON:0015117 lamina terminalis of cerebral hemisphere | 361483008 | 730446002 |
| UBERON:0015155 conjunctival space | 280957009 | 729538002 |
| UBERON:0015226 bulbar spiral septum | 361469006 | 730434001 |
| UBERON:0015472 tracheobronchial lymph node | 245341003 | 728267006 |
| UBERON:0015704 sagittal sinus | 244400002 | 727959007 |
| UBERON:0015881 internal iliac lymph node | 245357003 | 728274001 |
| UBERON:0015923 superficial parotid lymph node | 279141006 | 728899006 |
| UBERON:0015925 superficial intraparotid lymph node | 68339009 | 727179000 |
| UBERON:0016392 mastoid lymph node | 245328002 | 728262000 |
| UBERON:0016392 mastoid lymph node | 279143009 | 728901002 |
| UBERON:0016393 deep parotid lymph node | 279142004 | 728900001 |
| UBERON:0016416 anterior chest | 182331006 | 727751002 |
| UBERON:0016497 epicondyle of humerus | 272693008 | 728734006 |
| UBERON:0016634 premotor cortex | 90928005 | 730838005 |
| UBERON:0016930 ridge of tooth | 245699009 | 728367008 |
| UBERON:0016933 oblique ridge of tooth | 245701009 | 728369006 |
| UBERON:0016934 marginal ridge of tooth | 245700005 | 728368003 |
| UBERON:0016937 transverse marginal ridge of tooth | 245702002 | 728370007 |
| UBERON:0016938 mesial marginal ridge of tooth | 278475009 | 728819005 |
| UBERON:0016939 distal marginal ridge of tooth | 278476005 | 728820004 |
| UBERON:0018103 posterior fascicle of palatopharyngeus | 244801005 | 728079004 |
| UBERON:0018104 parafoveal part of retina | 264120002 | 728653007 |
| UBERON:0018105 perifoveal part of retina | 280617008 | 729463000 |
| UBERON:0018107 foveola of retina | 399857002 | 730624000 |
| UBERON:0018398 superior alveolar nerve | 280235006 | 729280004 |
| UBERON:0018412 vidian nerve | 280273005 | 729307002 |
| UBERON:0019190 mucous gland of lung | 88410004 | 727289008 |
| UBERON:0019199 lateral side of chest | 182332004 | 727752009 |
| UBERON:0019210 pole of lens | 280630009 | 729467004 |
| UBERON:0019243 skin crease | 280385004 | 729373004 |
| UBERON:0019246 palmar skin crease | 244159001 | 727879003 |
| UBERON:0019247 plantar skin crease | 244192007 | 727902007 |
| UBERON:0019303 occipital sulcus | 314148004 | 730020008 |
| UBERON:0022244 anterior orbital gyrus | 279196000 | 1359916007 |
| UBERON:0022297 palpebral branch of infra-orbital nerve | 280236007 | 729281000 |
| UBERON:0022301 long ciliary nerve | 280228003 | 729276009 |
| UBERON:0022302 short ciliary nerve | 417598000 | 730663007 |
| UBERON:0022358 placenta blood vessel | 280716005 | 729495004 |
| UBERON:0022361 lung field | 34922002 | 726980009 |
| UBERON:0022421 pontocerebellar tract | 360457005 | 730178001 |
| UBERON:0026586 vestibular canal | 279736007 | 729099003 |
| UBERON:0028194 spiral prominence of cochlear duct | 279843007 | 729149004 |
| UBERON:0034688 spermatic fascia | 279652001 | 729062003 |
| UBERON:0034712 yellow fibrocartilage | 1456008 | 726042005 |
| UBERON:0034725 pterygopalatine nerve | 58267004 | 727120004 |
| UBERON:0034765 glabella skin | 244083007 | 727840009 |
| UBERON:0034773 uncus of parahippocampal gyrus | 279213004 | 728905006 |
| UBERON:0034901 cervical sympathetic nerve trunk | 280533000 | 729419009 |
| UBERON:0034971 aortic body | 75061007 | 727219004 |
| UBERON:0034972 jugular body | 181381004 | 727613007 |
| UBERON:0034984 nerve to quadratus femoris | 280351000 | 729360003 |
| UBERON:0034988 tendon of obturator internus | 245172006 | 728193009 |
| UBERON:0035039 rectal artery | 277967008 | 728806006 |
| UBERON:0035079 deep intraparotid lymph node | 75040000 | 727218007 |
| UBERON:0035109 plantar nerve | 181074000 | 727582000 |
| UBERON:0035122 interincisive suture | 245781007 | 728418007 |
| UBERON:0035149 gingival epithelial attachment | 85036004 | 727264002 |
| UBERON:0035162 infraclavicular lymph node | 9659009 | 725600002 |
| UBERON:0035237 branch of internal carotid artery | 360629008 | 730223002 |
| UBERON:0035252 left subcostal vein | 361639006 | 1240434003 |
| UBERON:0035292 branch of posterior tibial artery | 314363005 | 730091003 |
| UBERON:0035304 branch of ulnar artery | 360551008 | 730208007 |
| UBERON:0035307 branch of vertebral artery | 360535000 | 730202008 |
| UBERON:0035341 posterior lobe of prostate | 66012001 | 727169002 |
| UBERON:0035350 branch of middle cerebral artery | 314302003 | 730069005 |
| UBERON:0035359 branch of brachial artery | 360543005 | 730206006 |
| UBERON:0035380 branch of anterior cerebral artery | 314304002 | 730071005 |
| UBERON:0035386 space of Mall | 89510009 | 727297001 |
| UBERON:0035395 branch of left coronary artery | 244248004 | 727918001 |
| UBERON:0035398 branch of external carotid artery | 244216003 | 727911007 |
| UBERON:0035416 diaphragma sellae | 32967008 | 730824003 |
| UBERON:0035438 mucoid tissue | 61115003 | 727134004 |
| UBERON:0035468 costodiaphragmatic recess | 46297007 | 1297172001 |
| UBERON:0035474 right subcostal vein | 361638003 | 730541009 |
| UBERON:0035480 surface of prostate | 279694003 | 729083009 |
| UBERON:0035489 branch of basilar artery | 360537008 | 730203003 |
| UBERON:0035501 unencapsulated tactile receptor | 38005009 | 726997003 |
| UBERON:0035508 branch of posterior cerebral artery | 314305001 | 730072003 |
| UBERON:0035642 laryngeal nerve | 307013006 | 729850001 |
| UBERON:0035769 mesenteric ganglion | 314754005 | 730134005 |
| UBERON:0035771 mesenteric plexus | 314752009 | 730132009 |
| UBERON:0035814 pericardial fat | 42267001 | 727020001 |
| UBERON:0035845 enthesis | 410054009 | 725969002 |
| UBERON:0035924 radiation of corpus callosum | 279308000 | 728928007 |
| UBERON:0035925 central sulcus of insula | 279348008 | 728938002 |
| UBERON:0035927 sulcus of parietal lobe | 314145001 | 730019002 |
| UBERON:0036143 meningeal branch of mandibular nerve | 280249002 | 730976003 |
| UBERON:0036264 zygomaticotemporal nerve | 280243001 | 729285009 |
| UBERON:0036265 conjunctival papilla | 280681004 | 729486007 |
| UBERON:0036266 pars interarticularis of vertebra | 705098005 | 731518006 |
| UBERON:0036267 vulval vein | 279975006 | 731142001 |
| UBERON:0036269 penis blood vessel | 363673006 | 731857006 |
| UBERON:0036301 vasculature of spleen | 297287005 | 731758006 |
| UBERON:1000023 spleen pulp | 13515001 | 726860009 |
| UBERON:1200342 bone marrow of skull | 712962003 | 731610008 |
- 主要言語
- Emacs Lisp
- スター
- 166
- フォーク
- 42
- 平均マージ
- 23時間 31分
- マージ済み PR(30日)
- 10
環境構築
- Dockerfile・Docker Compose ファイルなし
- プルリクエストのテンプレートなし
- コントリビューションガイドを読む
はじめの一歩
- issue を最後まで読み、次にプロジェクトのコントリビューションガイドを読みます。
- 着手することを issue にコメントします — 二人が同じ作業をするのを防げます。
- リポジトリをフォークし、ブランチを切って変更します。
- issue 番号を参照したプルリクエストを送ります。
obophenotype/uberon のほかの issue
-
uberon-classhierarchy
難易度 2/5 1〜3時間 初心者へのやさしさ 62/100
obophenotype/uberon#3808 · コメント 5 件 ·
メンテナーはふだん 1 日以内に返信
-
uberon-classhierarchy
難易度 2/5 1〜3時間 初心者へのやさしさ 62/100
obophenotype/uberon#3800 ·
メンテナーはふだん 1 日以内に返信
-
難易度 2/5 1〜3時間 初心者へのやさしさ 65/100
obophenotype/uberon#3785 ·
メンテナーはふだん 1 日以内に返信
-
難易度 2/5 1〜3時間 初心者へのやさしさ 84/100
obophenotype/uberon#3780 ·
メンテナーはふだん 1 日以内に返信
-
State publicly where specimen / sample-type terms belong (organoid, cell culture, PBMC, biopsy)オープン
難易度 2/5 1〜3時間 初心者へのやさしさ 68/100
obophenotype/uberon#3766 ·
メンテナーはふだん 1 日以内に返信
obophenotype/uberon の issue をすべて見る
似ている issue
-
難易度 2/5 1〜3時間 初心者へのやさしさ 72/100
-
bug
難易度 2/5 1〜3時間 初心者へのやさしさ 72/100
topoteretes/cognee#6470 · コメント 1 件 ·
メンテナーはふだん 1 日以内に返信
-
難易度 2/5 1〜3時間 初心者へのやさしさ 72/100
-
難易度 2/5 1〜3時間 初心者へのやさしさ 70/100
メンテナーはふだん 2 日以内に返信
-
難易度 2/5 1〜3時間 初心者へのやさしさ 66/100
メンテナーはふだん 1 日以内に返信