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splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq

Is bedapub/splicekit beginner-friendly?

We have not seen enough recent pull requests from outside contributors to bedapub/splicekit to say how often they are merged. No beginner-friendly issue is open right now; the list below has the other issues we hold for it.

Stars
23
Forks
4
Open beginner issues
0
Indexed issues
5
Avg merge
1m
Merged PRs (30d)
2
Dominant language
Python
License
GPL-3.0
Last GitHub push
Sep 17, 2026
Latest indexed
Sep 14, 2026
Contributing guide
No contributing guide
Code of conduct
No code of conduct
Beginner labels
No beginner labels indexed

How to contribute to bedapub/splicekit

  1. There is no contributing guide, so start from the README and a few recently merged pull requests to see how changes are proposed.
  2. It ships a Dockerfile or Docker Compose file, so you can run it without installing its whole toolchain.
  3. Your contributions will be published under the project's GPL-3.0 license.
  4. Follow the repository to hear when a new beginner-friendly issue opens, or look through the other issues below.

Issues somebody may already be working on are listed last. List everything by date

  • Multiple RNA-protein binding analysis on same dataset
    May be free again @grexor claimed this 377 days ago, and no pull request is open. Open

    bedapub/splicekit#104 · 1 assignee ·

  • Inquiry About Integrating RBP Binding and Knockdown RNA-seq in Splicekit
    Open

    Difficulty 5/5 Over a week Newbie friendliness 20/100

    bedapub/splicekit#100 · 42 comments ·

  • Running commands directly from Snakemake, not via splicekit shell
    May be free again @grexor claimed this 579 days ago, and no pull request is open. Open

    bedapub/splicekit#96 · 1 assignee ·

  • One single config file
    May be free again @grexor claimed this 579 days ago, and no pull request is open. Open

    bedapub/splicekit#94 · 1 comment · 1 assignee ·

  • Dispersion plot
    May be free again @grexor claimed this 594 days ago, and no pull request is open. Open

    bedapub/splicekit#93 · 1 assignee ·

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