Hacktoberfest 2026:维护者为十月标记出来的 issue,仍然开放、适合新手。 浏览 Hacktoberfest issue

Exception when preparing an amplicon library with a 384 well plate

未关闭
#475 0 条评论 0 个 reaction 已指派 0 人 在 GitHub 查看

还没有人认领这个 Issue。

评估

难度
3/5
预计耗时
1-2 天
新手友好度
45/100
Issue 类型
缺陷
描述清晰度
基本清楚
活跃度
停滞
技术栈
python
领域
backend

调研方向

先从 gui/handlers/process_handlers/library_prep_16s_process.py 中报告的 post handler 入手,然后检查 db/process.py 中 create primer_layout 附近的代码。使用一个 384 孔扩增子板和不匹配的引物板重现准备流程。完成的标准是:该情况通过显式验证得到处理,而不是产生报告中的 IndexError;在更改行为之前,确认预期的板尺寸规则。

由索引模型根据 Issue 内容生成。

描述

bug priority:high

In my test environment, I have amplicon 384-well plates. It appears that the prepare amplicon libraries page is not presently validating that the primer plates have the same number of wells. I'm not sure if we ever want to do 384 well amplicon plates, but we may want to have validation here to disallow the user from doing something they shouldn't be able to do.

I can't remember if this is a duplicate or not -- it felt familiar but I didn't see an issue when flipping through.

prepare_16s_libraries

AN ERROR HAS OCCURED!
Please copy the following into an issue in our github repository

Error
list index out of range

Traceback
Traceback (most recent call last): 
File "/Users/dtmcdonald/miniconda3/envs/labcontrol/lib/python3.7/site-packages/tornado/web.py", line 1697, in _execute result = method(*self.path_args, **self.path_kwargs) 
File "/Users/dtmcdonald/miniconda3/envs/labcontrol/lib/python3.7/site-packages/tornado/web.py", line 3174, in wrapper return method(self, *args, **kwargs) 
File "/Users/dtmcdonald/ResearchWork/software/labman/labcontrol/gui/handlers/process_handlers/library_prep_16s_process.py", line 88, in post for pid, pn, pp, ep, ep300, ep50, mm, w in json_decode(plates_info) 
File "/Users/dtmcdonald/ResearchWork/software/labman/labcontrol/gui/handlers/process_handlers/library_prep_16s_process.py", line 88, in for pid, pn, pp, ep, ep300, ep50, mm, w in json_decode(plates_info) 
File "/Users/dtmcdonald/ResearchWork/software/labman/labcontrol/db/process.py", line 933, in create primer_layout[i][j].composition) 
IndexError: list index out of range 
主要语言
Python
星标
2
派生
15
PR 合并指标
30 天内没有已合并 PR

贡献指南

这个仓库没有索引到贡献指南

从这里开始

  1. 先读完整个 Issue,再读项目的贡献指南。
  2. 在 Issue 下留言说明你要接手 —— 这能避免两个人做同样的事。
  3. Fork 仓库,在一个分支上完成修改。
  4. 提交 Pull Request,并在描述里引用这个 Issue 编号。

biocore/LabControl 的其他 Issue

查看 biocore/LabControl 的全部 Issue

相似的 Issue

更多 Python Issue

把新 issue 发到你的邮箱

精选适合新手参与的 GitHub issue 摘要。