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JOSS paper on ECCE 9

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評估

難度
4/5
預估耗時
3-5 天
新手友好度
35/100
Issue 類型
文件
描述清晰度
基本清楚
活躍度
活躍
領域
documentation

研究方向

Before drafting, verify the PNNL ECCE publications and real references, confirm co-authorship and permission for teaching-use evidence, and decide whether to wait for the Umeå lab evidence. Follow the linked JOSS paper format and policies; gather evidence for the outline, then draft within JOSS’s word and section requirements. Done when the manuscript and figure meet those requirements and all claims and references have been verified by the authors.

由索引模型根據 Issue 內容生成。

描述

A paper in the Journal of Open Source Software, submitted after 9.0 leaves beta (reviewers install and test the software). JOSS: 750–1,750 words; required sections Summary, Statement of need, State of the field, Software design, Research impact statement, AI usage disclosure (format, policies).

Outline

Section ~Words Content
Summary 150 what a quantum-chemistry calculation is; what ECCE does (build, set up for several codes, run locally or on a cluster, keep calculations with results, view orbitals/spectra/geometries); free on Linux, Windows, macOS
Statement of need 250 researchers using several codes and clusters; teaching (students build, run and inspect calculations); one interface and data store; ECCE-QM for teaching without installs
State of the field 300 fair, sourced comparison (Avogadro, Gabedit, IQmol, Jmol/ChimeraX, WebMO, SEAMM, commercial front ends); build-vs-contribute: reviving the original design (code registration, managed data, central server)
Software design 400 code registration; client/server split and local mode; modernisation without a rewrite (2013 behaviour as reference, seven bundled libraries replaced); ECCE-QM (libcint + libxc); verification (teaching set, CI on three systems)
Research impact 250 evidence only: PNNL-era use and publications, NWChem's GUI; teaching use (with permission); releases, downloads, packages, Zenodo DOI; regression suite
AI usage disclosure 150 Claude (model/version), where used (code, tests, documentation, manuscript drafting), kind of help, human review and validation, design decisions by the authors
Acknowledgements 50 PNNL/EMSL's original team and DOE funding; testers

One figure: the client/server/compute diagram, or a composite screenshot.

Before drafting: PNNL's ECCE publications (real references only); co-authorship and permission to cite teaching use; whether to wait for the Umeå lab as evidence.

AI rules (JOSS): drafting with AI is allowed and disclosed. The authors verify every claim and reference and are responsible for them. Replies to editors and reviewers in the review thread are written by the authors themselves (AI only for translation); code and paper changes requested in review may be made with AI help as before. Related: #250 (citation).

主要語言
C
星號
10
分支
8
平均合併
21 分鐘
30 天內合併 PR
1

環境準備

這個專案沒有提供開發容器、Dockerfile 或貢獻指南，環境需要你自己搭建：先看它的 README，通用步驟見我們的新手貢獻指南。

從這裡開始

  1. 先讀完整個 Issue，再讀專案的貢獻指南。
  2. 在 Issue 下留言說明你要接手 —— 這能避免兩個人做同樣的事。
  3. Fork 儲存庫，在一個分支上完成修改。
  4. 送出 Pull Request，並在描述裡引用這個 Issue 編號。

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