Implement variant to gene assignment using gencode
@HolEv is already working on this.
Since Apr 14, 2026.
Assessment
This issue has not been assessed yet.
Description
Description of feature
- Allow variants to gene mappings using gencode gtfs, window size, and variant chrom pos ref alt.
- store this assignment in uns
- Dominant language
- Python
- Stars
- 25
- Forks
- 8
- Avg merge
- 2m
- Merged PRs (30d)
- 4
Getting set up
- No Dockerfile or Docker Compose file
- No pull request template
- Read the contributing guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
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