seek4science

Issues somebody may already be working on are listed last. List everything by date

• 500 error when trying to upload ro-crate

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  Difficulty 3/5 1-2 days Newbie friendliness 56/100

  seek4science/seek#2761 · 1 reaction · Opened Oct 21, 2026

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• Cannot create Assay from Experiment Sample Template

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  Difficulty 3/5 1-2 days Newbie friendliness 53/100

  seek4science/seek#2742 · Opened Sep 24, 2026

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• The preview panel of the files tab breaks any external images.

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  Difficulty 4/5 3-5 days Newbie friendliness 42/100

  seek4science/seek#2710 · Opened Aug 4, 2026

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• For cloud usage: add a CI step to release a tar-gz of the solr config folder

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  Difficulty 2/5 1-3 hours Newbie friendliness 57/100

  seek4science/seek#2702 · 1 comment · Opened Jul 30, 2026

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• Add a search help pop windows that gives advice about wild cards and boolean operators

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  Difficulty 2/5 1-3 hours Newbie friendliness 48/100

  seek4science/seek#2699 · 1 comment · Opened Jul 24, 2026

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• Export units to ISA-JSON

  May be free again @kdp-cloud claimed this 99 days ago, and no pull request is open. Open

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  seek4science/seek#2684 · 1 assignee · Opened Jul 20, 2026

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• SPARQL endpoint information from the SPARQL page

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  Difficulty 2/5 1-3 hours Newbie friendliness 55/100

  seek4science/seek#2683 · Opened Jul 20, 2026

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• OtherMaterial cannot be a SEEK Title for MARS

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  documentation

  Difficulty 2/5 1-3 hours Newbie friendliness 56/100

  seek4science/seek#2680 · Opened Jul 16, 2026

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• Cannot export ISA-JSON after adding SOP TYPE

  May be free again @kdp-cloud claimed this 105 days ago, and no pull request is open. Open

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  bug

  seek4science/seek#2675 · 1 comment · 1 assignee · Opened Jul 14, 2026

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• Update vendored COPASI JavaScript library (COPASI.js)

  May be free again @whomingbird claimed this 110 days ago, and no pull request is open. Open

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  enhancement

  seek4science/seek#2662 · 1 assignee · Opened Jul 8, 2026

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• Content Security Policy check

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  Difficulty 4/5 3-5 days Newbie friendliness 45/100

  seek4science/seek#2658 · 1 reaction · Opened Jul 7, 2026

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• People: Unclear how to set/change "location"; current value is wrong

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  Difficulty 2/5 1-3 hours Newbie friendliness 70/100

  seek4science/seek#2653 · 1 comment · 1 reaction · Opened Jul 5, 2026

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• Sample Type's spreadsheet upload allows any registered sample in the metadata

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  bug

  Difficulty 3/5 1-2 days Newbie friendliness 52/100

  seek4science/seek#2651 · Opened Jul 1, 2026

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• Missing validation in templates

  May be free again @kdp-cloud claimed this 119 days ago, and no pull request is open. Open

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  datahub

  seek4science/seek#2644 · 1 assignee · Opened Jun 30, 2026

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• Upload spreadsheet does not pick up changes

  May be free again @kdp-cloud claimed this 123 days ago, and no pull request is open. Open

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  bug datahub

  seek4science/seek#2641 · 1 assignee · Opened Jun 26, 2026

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• Sample Attribute Type support

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  datahub question

  Difficulty 4/5 3-5 days Newbie friendliness 48/100

  seek4science/seek#2623 · 1 comment · Opened Jun 16, 2026

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• ISA-JSON compliant assay shown in wrong order in seek tree view

  May be free again @NielsGeudens claimed this 172 days ago, and no pull request is open. Open

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  bug datahub

  seek4science/seek#2570 · 1 comment · 2 assignees · Opened May 8, 2026

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• Graph view for ISA-JSON compliant experiment

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  datahub enhancement

  Difficulty 5/5 Over a week Newbie friendliness 30/100

  seek4science/seek#2559 · Opened May 4, 2026

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• Prevent deletion of used SOPs

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  Difficulty 4/5 3-5 days Newbie friendliness 38/100

  seek4science/seek#2537 · Opened Apr 3, 2026

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• Allow free text for Model types, format and environments

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  bioindustry

  Difficulty 4/5 3-5 days Newbie friendliness 35/100

  seek4science/seek#2529 · Opened Mar 18, 2026

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• EST creation allows missing protocol ISA tag, but Study implementation fails later with unclear error

  May be free again @kdp-cloud claimed this 138 days ago, and no pull request is open. Open

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  datahub

  seek4science/seek#2508 · 1 comment · 1 assignee · Opened Feb 20, 2026

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• Wrong redirection from 'Edit' page when canceling

  May be free again @kdp-cloud claimed this 138 days ago, and no pull request is open. Open

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  seek4science/seek#2496 · 1 comment · 1 assignee · Opened Feb 13, 2026

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• Add scoping mechanism to controlled vocabularies

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  cv-ontology

  Difficulty 5/5 Over a week Newbie friendliness 25/100

  seek4science/seek#2476 · Opened Jan 19, 2026

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• Sharing form "access type" constraints are not updated if settings changed

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  Difficulty 2/5 1-3 hours Newbie friendliness 48/100

  seek4science/seek#2472 · Opened Jan 14, 2026

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• Private project is not private

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  Difficulty 4/5 3-5 days Newbie friendliness 35/100

  seek4science/seek#2458 · 2 comments · Opened Dec 16, 2025

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• Adding permissions to controlled vocabularies

  May be free again @kdp-cloud claimed this 315 days ago, and no pull request is open. Open

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  enhancement

  seek4science/seek#2457 · 1 assignee · Opened Dec 16, 2025

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• Add "country" filter for assets

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  enhancement

  Difficulty 4/5 3-5 days Newbie friendliness 32/100

  seek4science/seek#2450 · Opened Dec 10, 2025

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• enabling discovery of WorkflowHub workflows from arXiv papers

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  Difficulty 5/5 Over a week Newbie friendliness 25/100

  seek4science/seek#2403 · 4 comments · Opened Nov 13, 2025

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• Error when creating a workflow if default branch in git config is not master

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  Difficulty 3/5 1-2 days Newbie friendliness 35/100

  seek4science/seek#2401 · Opened Nov 12, 2025

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• Support DOIs from mEDRA and other Registration Agencies

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  enhancement publication

  Difficulty 4/5 3-5 days Newbie friendliness 35/100

  seek4science/seek#2400 · Opened Nov 12, 2025

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• Error message: Invalid value for attribute type (e.g., Date field)

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  datahub enhancement

  Difficulty 3/5 Half a day Newbie friendliness 48/100

  seek4science/seek#2397 · Opened Nov 7, 2025

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• Error message: Blank values for mandatory attribut

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  datahub enhancement

  Difficulty 2/5 1-3 hours Newbie friendliness 35/100

  seek4science/seek#2396 · Opened Nov 7, 2025

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• Error message: Typo in empty row causes unclear error

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  datahub enhancement

  Difficulty 3/5 1-2 days Newbie friendliness 35/100

  seek4science/seek#2395 · Opened Nov 7, 2025

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• Error message: Gibberish entered in registered Sample field

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  datahub enhancement

  Difficulty 3/5 1-2 days Newbie friendliness 25/100

  seek4science/seek#2394 · Opened Nov 7, 2025

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• Error message: ID of registered Sample does not exist

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  datahub enhancement

  Difficulty 3/5 1-2 days Newbie friendliness 45/100

  seek4science/seek#2393 · Opened Nov 7, 2025

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• Error message: Mismatch between ID and title in registered Sample attribute

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  datahub enhancement

  Difficulty 3/5 1-2 days Newbie friendliness 35/100

  seek4science/seek#2392 · Opened Nov 7, 2025

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• Error message: Unexpected token when using a list of registered Samples

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  datahub enhancement

  Difficulty 2/5 1-3 hours Newbie friendliness 38/100

  seek4science/seek#2391 · Opened Nov 7, 2025

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• Error message: Unexpected token when using wrong syntax

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  datahub enhancement

  Difficulty 3/5 1-2 days Newbie friendliness 35/100

  seek4science/seek#2390 · Opened Nov 7, 2025

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• Error message: No Sample name in uploaded Excel sheet.

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  datahub enhancement

  Difficulty 3/5 1-2 days Newbie friendliness 38/100

  seek4science/seek#2389 · Opened Nov 7, 2025

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• Improve understandability of error messages

  May be free again @kdp-cloud claimed this 354 days ago, and no pull request is open. Open

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  datahub enhancement

  seek4science/seek#2388 · 2 assignees · Opened Nov 7, 2025

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• Import Programme details from cordis

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  bioindustry IBISBA

  Difficulty 5/5 Over a week Newbie friendliness 35/100

  seek4science/seek#2381 · Opened Oct 30, 2025

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• External search adapters should be configurable via settings

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  enhancement

  Difficulty 4/5 3-5 days Newbie friendliness 25/100

  seek4science/seek#2375 · 2 comments · Opened Oct 22, 2025

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• Check all content in a project if it is public/internal/private etc...

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  Difficulty 5/5 Over a week Newbie friendliness 25/100

  seek4science/seek#2368 · 1 comment · Opened Oct 20, 2025

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• Prevent deletion of samples that have children samples linked to them

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  bug

  Difficulty 3/5 1-2 days Newbie friendliness 52/100

  seek4science/seek#2349 · 1 comment · Opened Oct 2, 2025

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• Export Protocol to ISA-JSON

  May be free again @kdp-cloud claimed this 412 days ago, and no pull request is open. Open

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  datahub documentation enhancement

  seek4science/seek#2326 · 1 assignee · Opened Sep 10, 2025

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• WorkflowHub: add support for workflows created by {targets} R package

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  Difficulty 4/5 3-5 days Newbie friendliness 35/100

  seek4science/seek#2320 · Opened Sep 5, 2025

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• DOIs for collections

  May be free again @fbacall claimed this 419 days ago, and no pull request is open. Open

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  seek4science/seek#2319 · 1 comment · 1 assignee · Opened Sep 3, 2025

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• Enable Encrypted MySQL connection?

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  Difficulty 3/5 1-2 days Newbie friendliness 35/100

  seek4science/seek#2313 · Opened Sep 1, 2025

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• "Add to collection" button doesn't show for related team members unless individual is added as manager

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  Difficulty 3/5 1-2 days Newbie friendliness 30/100

  seek4science/seek#2307 · Opened Aug 28, 2025

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• Sample batch sharing permission - unexpected behaviour

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  bug

  Difficulty 3/5 1-2 days Newbie friendliness 48/100

  seek4science/seek#2304 · 1 comment · Opened Aug 20, 2025

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