Remove Euler cluster instructions from docs

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  • Algo errado?
#1,309 1 comentário 0 reações 0 responsáveis Ver no GitHub

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Avaliação

Dificuldade
3/5
Tempo estimado
Meio dia
Facilidade para iniciantes
49/100
Tipo de issue
Documentação
Clareza
Razoavelmente clara
Status de atividade
Pouca atividade
Stack de tecnologia
jupyter, python
Domínio
documentation

Direção de pesquisa

Start with the developer guide page Guide_Euler.html and compare its Euler installation instructions with the linked climada-on-euler instructions and the notes in this issue. The issue asks whether to update the guide and raises an unresolved question about loading R for Jupyter, so first confirm the intended approach with maintainers. Done means the guide has approved, current instructions and the Jupyter setup notes are addressed.

Escrita pelo modelo de indexação a partir do texto da issue.

Descrição

accepting pull request user-friendliness

I realized that the informations to install CLIMADA on Euler in the developer guide (https://climada-python.readthedocs.io/en/latest/development/Guide_Euler.html) are no longer up-to-date. I have followed the instructions from https://gitlab.ethz.ch/climada/climada-on-euler, (posted on slack) and it worked. I have gathered a few issues I encountered during the install + added some notes below. @carmensteinmann I think you also had some issues with CLIMADA on Euler recently, so in case you have other tips or issues that you want to share feel free to add them here. @emanuel-schmid would you like me to update the developer's guide with this new set of instructions or is this still work in progress?

Install CLIMADA for a specific branch

  1. Follow instructions to install climada 6.1 (https://gitlab.ethz.ch/climada/climada-on-euler)
  2. Checkout target climada or climada_petals branch
  3. Activate virtual environment using source ./use-climada.sh [ENVDIR] [VERSION]
  4. pip install -e path/to/climada_python/or/climada_petals

Compatibility

Use CLIMADA in a jupyter notebook

  • The set-up of the jupyter server was failing due to some missing R command (/cluster/software/others/services/jupyterhub/scripts/jupyterlab.sh: line 21: R: command not found) but adding r/4.3.2 \ to the scripts/load-climada-modules.sh fixed the issue:
#!/bin/bash

module purge
module load \
  gcc/12.2.0 \
  stack/2024-06 \
  python/3.11.6 \
  hdf5/1.14.3 \
  geos/3.9.1 \
  sqlite/3.43.2 \
  eccodes/2.25.0 \
  gdal/3.6.3 \
  r/4.3.2 \
  eth_proxy

@emanuel-schmid is there a reason why this was not there in the first place and will this cause issues?

Linguagem predominante
Jupyter Notebook
Estrelas
478
Forks
166
Merge médio
7d 17h
PRs com merge (30d)
4

Preparar o ambiente

Primeiros passos

  1. Leia a issue inteira e depois o guia de contribuição do projeto.
  2. Comente na issue dizendo que vai assumir — evita que duas pessoas façam o mesmo trabalho.
  3. Faça um fork do repositório e trabalhe em uma branch.
  4. Abra um pull request que referencie o número da issue.

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