nf-core/sopa
Nextflow version of Sopa - spatial omics pipeline and analysis
Is nf-core/sopa beginner-friendly?
We have not seen enough recent pull requests from outside contributors to nf-core/sopa to say how often they are merged. No beginner-friendly issue is open right now; the list below has the other issues we hold for it.
- Stars
- 21
- Forks
- 7
- Open beginner issues
- 0
- Indexed issues
- 4
- Avg merge
- 3d 7h
- Merged PRs (30d)
- 3
- Dominant language
- Nextflow
- License
- MIT
- Last GitHub push
- Oct 8, 2026
- Latest indexed
- Sep 19, 2026
- Contributing guide
- Contributing guide
- Code of conduct
- Code of conduct
- Beginner labels
- No beginner labels indexed
How to contribute to nf-core/sopa
- Read the contributing guide first: it says how the maintainers want changes proposed, tested and reviewed.
- The project ships a dev container: open it in Codespaces to get a working environment in your browser.
- Read its code of conduct: it covers issues and pull requests as well as chat.
- Follow the repository to hear when a new beginner-friendly issue opens, or look through the other issues below.
Loading issues
Issues somebody may already be working on are listed last. List everything by date
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enhancement
Difficulty 2/5 1-3 hours Newbie friendliness 63/100
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Accelerate scverse/scanpy steps with rapids-singlecellMay be free again @Zethson claimed this 165 days ago, and no pull request is open. Openenhancement
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enhancement
Difficulty 4/5 3-5 days Newbie friendliness 48/100
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bug
Difficulty 4/5 3-5 days Newbie friendliness 25/100