py38 functional tests run forever

Aperta
#236 6 commenti 0 reazioni 0 assegnatari Vedi su GitHub

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Valutazione

Difficoltà
3/5
Tempo stimato
1-2 giorni
Idoneità per principianti
45/100
Tipo di issue
Bug
Chiarezza
Abbastanza chiara
Stato di attività
Ferma
Stack tecnologico
pandas, python
Ambito
testing-qa

Direzione di ricerca

Inizia con il test funzionale per select_combos basato sull’esempio simple1, quindi esamina bluepymm/select_combos/reporting.py intorno alle righe 313 e 379-384. Riproduci l’esecuzione e determina cosa succede dopo l’ultimo output di log; è completato quando il test termina invece di bloccarsi.

Scritto dal modello di indicizzazione a partire dal testo della issue.

Descrizione

The run step freezes after bluepymm.select_combos: test select_combos based on example simple1 test is executed.

Here is the last log produced, nothing else gets written after this log.

   bluepymm.select_combos: test select_combos based on example simple1 ... /home/runner/work/BluePyMM/BluePyMM/bluepymm/select_combos/reporting.py:379: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.
    ext_neurondb = ext_neurondb.append(emodel_ext_neurondb_rows)
  /home/runner/work/BluePyMM/BluePyMM/bluepymm/select_combos/reporting.py:381: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.
    megate_passed_all = megate_passed_all.append(
  /home/runner/work/BluePyMM/BluePyMM/bluepymm/select_combos/reporting.py:383: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.
    median_scores = median_scores.append(emodel_median_scores)
  /home/runner/work/BluePyMM/BluePyMM/bluepymm/select_combos/reporting.py:384: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.
    passed_combos = passed_combos.append(emodel_passed_combos)
  /home/runner/work/BluePyMM/BluePyMM/bluepymm/select_combos/reporting.py:379: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.
    ext_neurondb = ext_neurondb.append(emodel_ext_neurondb_rows)
  /home/runner/work/BluePyMM/BluePyMM/bluepymm/select_combos/reporting.py:381: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.
    megate_passed_all = megate_passed_all.append(
  /home/runner/work/BluePyMM/BluePyMM/bluepymm/select_combos/reporting.py:383: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.
    median_scores = median_scores.append(emodel_median_scores)
  /home/runner/work/BluePyMM/BluePyMM/bluepymm/select_combos/reporting.py:384: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.
    passed_combos = passed_combos.append(emodel_passed_combos)
  /home/runner/work/BluePyMM/BluePyMM/bluepymm/select_combos/reporting.py:313: UserWarning: Tight layout not applied. The bottom and top margins cannot be made large enough to accommodate all axes decorations.
    plt.tight_layout()
  ok
Lingua principale
Python
Stelle
13
Fork
9
Metriche di merge delle PR
Nessuna PR unita negli ultimi 30g

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