ga4gh/phenopacket-schema

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• Historical procedures outside of medicalActions

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  Difficulty 5/5 Over a week Newbie friendliness 28/100

  ga4gh/phenopacket-schema#467 · Opened Oct 8, 2026

• Time and body site for treatments (e.g. eye drops, intravitreal injections)

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  Difficulty 5/5 Over a week Newbie friendliness 35/100

  ga4gh/phenopacket-schema#466 · Opened Oct 8, 2026

• Semantics of Measurement.timeObserved

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  Difficulty 2/5 1-3 hours Newbie friendliness 70/100

  ga4gh/phenopacket-schema#465 · Opened Oct 8, 2026

• Laterality / body site for measurements

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  ga4gh/phenopacket-schema#464 · Opened Oct 8, 2026

• Recommended prefix for UCUM units and handling of non-UCUM units

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  ga4gh/phenopacket-schema#463 · Opened Oct 8, 2026

• Comparator for Quantity values (e.g. "> 2000 cells/mm²")

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  ga4gh/phenopacket-schema#462 · Opened Oct 8, 2026

• Imprecise (month/year) and unknown dates in TimeElement

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  Difficulty 3/5 1-2 days Newbie friendliness 55/100

  ga4gh/phenopacket-schema#461 · Opened Oct 8, 2026

• Open-ended age ranges (e.g. ≥ 90 years) for de-identified data

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  Difficulty 2/5 1-3 hours Newbie friendliness 62/100

  ga4gh/phenopacket-schema#460 · Opened Oct 8, 2026

• Clinical reference date for a phenopacket (date of the encounter/report)

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  ga4gh/phenopacket-schema#459 · Opened Oct 8, 2026

• Incorrect HPO identifier for Macroscopic hematuria in the rare disease examples

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  Difficulty 4/5 3-5 days Newbie friendliness 68/100

  ga4gh/phenopacket-schema#458 · Opened Sep 29, 2026

• Add an optional `analyte` (OntologyClass, e.g. ChEBI) field to `Measurement`

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  ga4gh/phenopacket-schema#456 · Opened Sep 18, 2026

• Represent time-bound/fluctuating phenotype status

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  ga4gh/phenopacket-schema#454 · Opened Aug 26, 2026

• VitalStatus.Status = Alive is ambiguous

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  ga4gh/phenopacket-schema#453 · Opened Aug 21, 2026

• Explain the difference between `Disease` and `Interpretation > Diagnosis`

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  ga4gh/phenopacket-schema#449 · 2 comments · 1 reaction · Opened Jul 8, 2026

• Phenopackets do not allow for representation of provenance of key data elements

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  ga4gh/phenopacket-schema#448 · 1 comment · Opened Jul 7, 2026

• Update the Phenopackets Documentation

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  Difficulty 4/5 3-5 days Newbie friendliness 38/100

  ga4gh/phenopacket-schema#446 · Opened Jul 7, 2026

• Consider (breaking change) simplification or update of VRS.

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  ga4gh/phenopacket-schema#445 · Opened Jul 7, 2026

• Review RadiationTherapy feature

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  ga4gh/phenopacket-schema#444 · Opened Jul 7, 2026

• Create/Update/Disseminate Export Tools

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  ga4gh/phenopacket-schema#443 · Opened Jul 7, 2026

• Support variant representation and interpretation outside of a Disease context (e.g., PGx)

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  ga4gh/phenopacket-schema#441 · Opened Jun 12, 2026

• Expand temporal fields in PhenotypicFeature to support episodic occurrences

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  ga4gh/phenopacket-schema#440 · 1 comment · Opened Jun 12, 2026

• Allow semantic linking of schema elements (e.g., Inferred Phenotypic Features from Measurements)

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  ga4gh/phenopacket-schema#439 · Opened Jun 12, 2026

• Update to the latest Protobuf version

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  ga4gh/phenopacket-schema#437 · Opened Jun 12, 2026

• Add `Sequence` variant to `TimeElement`

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  ga4gh/phenopacket-schema#436 · Opened Jun 10, 2026

• Possible improvements to GestationalAge

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  ga4gh/phenopacket-schema#433 · 4 comments · Opened Apr 17, 2026

• Schema: Causing Agent for Diseaes and Phenotypes

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  ga4gh/phenopacket-schema#432 · 2 comments · Opened Mar 31, 2026

• Software References

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  Difficulty 4/5 3-5 days Newbie friendliness 48/100

  ga4gh/phenopacket-schema#429 · Opened Mar 25, 2026

• How to model Disease Severity

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  ga4gh/phenopacket-schema#427 · 3 comments · Opened Mar 18, 2026

• Start/end date on treatment object

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  ga4gh/phenopacket-schema#426 · Opened Mar 12, 2026

• [request] more granularity within MedicalAction.adverse_events

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  ga4gh/phenopacket-schema#425 · Opened Mar 12, 2026

• [request] measurement.interpretation

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  ga4gh/phenopacket-schema#424 · Opened Mar 12, 2026

• Schema: Genetic Interpretations for unaffected individuals

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  ga4gh/phenopacket-schema#423 · Opened Mar 10, 2026

• Make Survival time in days an optional field

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  ga4gh/phenopacket-schema#422 · 2 comments · Opened Jan 27, 2026

• Allow multiple actions per Medical Action

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  ga4gh/phenopacket-schema#419 · 1 comment · Opened Jan 15, 2026

• Onset of first Diagnose

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  ga4gh/phenopacket-schema#418 · Opened Jan 12, 2026

• Name of the GeneDescriptor field in Python

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  ga4gh/phenopacket-schema#415 · Opened Dec 9, 2025

• Behavior of the call field in GenomicInterpretation

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  ga4gh/phenopacket-schema#414 · 1 comment · Opened Dec 9, 2025

• Version differences between PyPI and GitHub

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  ga4gh/phenopacket-schema#413 · 1 comment · Opened Dec 9, 2025

• More information on how to create a phenopacket using Python

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  ga4gh/phenopacket-schema#412 · 1 comment · Opened Dec 9, 2025

• Minor documentation flaw

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  ga4gh/phenopacket-schema#410 · 1 comment · Opened Dec 3, 2025

• How do you model smoking status in Phenopackets?

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  ga4gh/phenopacket-schema#409 · 7 comments · Opened Nov 13, 2025

• README : Reference implementation link should be updated

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  ga4gh/phenopacket-schema#407 · 1 comment · 1 reaction · Opened Nov 4, 2025

• Add examples for Python and Rust

  May be free again @pnrobinson claimed this 383 days ago, and no pull request is open. Open

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  ga4gh/phenopacket-schema#403 · 1 comment · 2 assignees · Opened Sep 30, 2025

• Register your usage here!

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  ga4gh/phenopacket-schema#398 · 2 comments · 2 reactions · Opened Aug 14, 2025

• Biosample geolocation data capture proposal

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  ga4gh/phenopacket-schema#396 · 2 comments · Opened Jun 11, 2025

• Measurements Block: minor bug in documentation

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  ga4gh/phenopacket-schema#394 · 1 comment · Opened Feb 18, 2025

• Claim ownership of FAIRsharing record on Phenopackets

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  ga4gh/phenopacket-schema#379 · 4 comments · Opened Jan 15, 2024

• Update protoc generation pipeline for Rust build

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  ga4gh/phenopacket-schema#368 · 14 comments · Opened Apr 10, 2023

• Remove old presentations from phenopackets.org splash page

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  ga4gh/phenopacket-schema#361 · 1 comment · Opened Nov 18, 2022

• Clarify how can applications tell which top level element is intended

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  ga4gh/phenopacket-schema#360 · 5 comments · Opened Nov 17, 2022