Add saveTiff option for MultiRoiRegistration as well
@j-friedrich is already working on this.
Since Oct 14, 2026.
Assessment
- Difficulty
- 2/5
- Estimated time
- 1-3 hours
- Newbie friendliness
- 76/100
Research direction
Start with the saveTiff parameter and the h5 saving branch in StripRegistration.m, then find where MultiRoiRegistration.m always writes motion-corrected movies as tif. Add the same saveTiff option to MultiRoiRegistration.m, defaulting to the current tif behaviour, and write h5 output when it is false. Done when both registration classes accept the option and produce the same output formats.
Written by the indexing model from the issue text.
Description
Currently MultiRoiRegistration.m always saves the motion corrected movies as tif files. In StripRegistration.m, the saveTiff parameter was added to optionally save motion corrected movies as h5 files to save on storage.
This same functionality should be added to MultiRoiRegistration.m as well
- Dominant language
- MATLAB
- Stars
- 3
- Forks
- 1
- PR merge metrics
- No merged PRs in 30d
Getting set up
This project ships no dev container, Dockerfile or contributing guide, so setting up is up to you: start from its README, and see our first-contribution guide for the general steps.
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
More from AllenNeuralDynamics/GIAnT-MATLAB
-
Difficulty 3/5 1-2 days Newbie friendliness 45/100
-
Difficulty 4/5 3-5 days Newbie friendliness 35/100
All issues in AllenNeuralDynamics/GIAnT-MATLAB
Similar issues
-
Difficulty 2/5 1-3 hours Newbie friendliness 72/100
VH-Lab/NDI-matlab#1026 ·
Maintainers usually reply within 1 day
-
Difficulty 1/5 Under an hour Newbie friendliness 78/100
-
bug
Difficulty 2/5 1-3 hours Newbie friendliness 68/100
-
curation
Difficulty 2/5 1-3 hours Newbie friendliness 77/100
SysBioChalmers/yeast-GEM#419 ·
-
enhancement
Difficulty 2/5 1-3 hours Newbie friendliness 85/100
catalystneuro/zarr-matlab#29 ·
Maintainers usually reply within 1 day