AllenInstitute/spatial_compare
package for comparing spatial transcriptomics datasets
Is AllenInstitute/spatial_compare beginner-friendly?
We have not seen enough recent pull requests from outside contributors to AllenInstitute/spatial_compare to say how often they are merged. No beginner-friendly issue is open right now; the list below has the other issues we hold for it.
- Stars
- 7
- Forks
- 8
- Open beginner issues
- 0
- Indexed issues
- 11
- Dominant language
- Jupyter Notebook
- License
- No license data
- Last GitHub push
- Sep 22, 2026
- Latest indexed
- Sep 20, 2026
- Contributing guide
- No contributing guide
- Code of conduct
- No code of conduct
- Beginner labels
- No beginner labels indexed
- PR merge metrics
- No merged PRs in 30d
How to contribute to AllenInstitute/spatial_compare
- There is no contributing guide, so start from the README and a few recently merged pull requests to see how changes are proposed.
- Follow the repository to hear when a new beginner-friendly issue opens, or look through the other issues below.
Issues somebody may already be working on are listed last. List everything by date
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Difficulty 4/5 3-5 days Newbie friendliness 35/100
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Difficulty 3/5 1-2 days Newbie friendliness 35/100
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Difficulty 4/5 3-5 days Newbie friendliness 30/100
AllenInstitute/spatial_compare#36 · 1 comment ·
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Difficulty 5/5 Over a week Newbie friendliness 25/100
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Difficulty 4/5 3-5 days Newbie friendliness 38/100
AllenInstitute/spatial_compare#14 · 5 comments ·
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label composition in relation to detectionMay be free again @kandarpRJ claimed this 692 days ago, and no pull request is open. Open
AllenInstitute/spatial_compare#11 · 2 comments · 1 assignee ·
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qc mask creationOpen
Difficulty 5/5 Over a week Newbie friendliness 25/100
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Difficulty 5/5 Over a week Newbie friendliness 20/100
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add testing for spatial_detection_scoreMay be free again @Margery0011 claimed this 692 days ago, and no pull request is open. Open
AllenInstitute/spatial_compare#6 · 1 comment · 1 assignee ·
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add testing for segmentation_compareMay be free again @egelfan2 claimed this 699 days ago, and no pull request is open. Open
AllenInstitute/spatial_compare#5 · 1 comment · 1 assignee ·
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change spatial_detection_score binning to be fixed bin sizePossibly taken @shachafl claimed this 692 days ago. Open
AllenInstitute/spatial_compare#8 · 2 comments · 1 assignee ·