theislab/interscale

InterScale: multi-scale cellular interaction analysis model for spatial transcriptomics

Stars: 12
Forks: 1
Open beginner issues: 0
Indexed issues: 8
Avg merge: 12h 51m
Merged PRs (30d): 1

Dominant language: Python
License: BSD-3-Clause
Last GitHub push: Sep 8, 2026
Latest indexed: Sep 20, 2026
Contributing guide: Contributing guide
Code of conduct: No code of conduct
Beginner labels: No beginner labels indexed

Beginner friendly Everything

Open All

8 open issues indexed

Upgrade numpy version Open

enhancement

Difficulty 3/5 1-2 days Newbie friendliness 64/100

theislab/interscale#59 · 1 comment · Opened Apr 29, 2026
Library key for spatial neighrbos MUST be included in .yaml Open

bug

Difficulty 4/5 3-5 days Newbie friendliness 35/100

theislab/interscale#44 · Opened Nov 7, 2025
Masking in Transformer Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 45/100

theislab/interscale#43 · Opened Nov 7, 2025
Load model without config Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 25/100

theislab/interscale#37 · Opened Sep 25, 2025
Re-mask input to transformer Open

backlog enhancement

Difficulty 4/5 3-5 days Newbie friendliness 35/100

theislab/interscale#18 · Opened May 9, 2025
Check AnnDataManager init and Config file set up coherence Open

bug

Difficulty 4/5 3-5 days Newbie friendliness 35/100

theislab/interscale#16 · Opened May 7, 2025
Mask all nodes once during loading Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 42/100

theislab/interscale#15 · Opened May 7, 2025
Geome Dataloader Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 25/100

theislab/interscale#8 · Opened Apr 30, 2025

A short digest of beginner-friendly GitHub issues.