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Repositórios de sokrypton

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sokrypton/7.571Jupyter Notebook

7.571 - Quantitative Analysis of Biological Data Material

Último commit 10 de mar. de 2026

 (4 stars) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/AM216Jupyter Notebook

Material for lecture

Último commit 14 de ago. de 2024

 (1 star) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/AccAdam_TF2Python

TF2-compatible Accumulated Gradients for Adam

Último commit 18 de mar. de 2022

 (1 star) (1 fork) (0 issues indexadas) (0 good first issues abertas)
sokrypton/AfDesign_partialJupyter Notebook

WIP

Último commit 7 de jul. de 2022

 (2 stars) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/CIRPINJupyter Notebook

Source code for CIRPIN: Learning Circular Permutation-Invariant Representations to Uncover Putative Protein Homologs

Último commit 4 de dez. de 2025

 (2 stars) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/ChaiFolder

Último commit 13 de mar. de 2026

 (1 star) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/ColabBioJupyter Notebook

random colab notebooks for biology

Último commit 23 de ago. de 2025

 (26 stars) (3 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/ColabDesignPython

Making Protein Design accessible to all via Google Colab!

Último commit 23 de out. de 2025

 (914 stars) (224 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/ColabDesign_paramsJupyter Notebook

params moved to seperate repo

Último commit 14 de jul. de 2023

 (1 star) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/ColabFoldJupyter Notebook

Making Protein folding accessible to all!

Último commit 29 de abr. de 2026

 (2.776 stars) (722 forks) (2 issues indexadas) (2 good first issues abertas)
sokrypton/DeepLearningExamplesJupyter Notebook

State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.

Último commit 22 de mai. de 2023

 (2 stars) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/EMBOIntegModelling23Jupyter Notebook

Último commit 22 de set. de 2023

 (2 stars) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/GREMLINMATLAB

GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the family. The strength of measured co-evolution is strongly predictive of residue-residue contacts in the 3D structure of the protein.

Último commit 3 de jul. de 2016

 (25 stars) (7 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/GREMLIN-GUIHTML

Último commit 20 de fev. de 2026

 (1 star) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/GREMLIN_CNNJupyter Notebook

Último commit 24 de out. de 2019

 (2 stars) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/GREMLIN_CPPJupyter Notebook

GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!

Último commit 17 de out. de 2022

 (60 stars) (25 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/GREMLIN_LHJupyter Notebook

Último commit 14 de mar. de 2025

 (8 stars) (3 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/HelixFoldPython

Último commit 5 de ago. de 2022

 (9 stars) (4 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/LigandMPNNPython

Último commit 16 de out. de 2025

 (0 stars) (0 forks) (0 issues indexadas) (0 good first issues abertas)
sokrypton/OmegaFoldPython

OmegaFold Release Code

Último commit 6 de ago. de 2022

 (7 stars) (5 forks) (0 issues indexadas) (0 good first issues abertas)