slowkow/regl-scatterplotJavaScript
Scalable WebGL-based scatter plot library build with Regl
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Repositórios
Repositórios de slowkow
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R package reverse dependency checking
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R wrapper for Van der Maaten's Barnes-Hut implementation of t-Distributed Stochastic Neighbor Embedding
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:sponge: Estimate sequencing saturation for GEX, VDJ, and ADT data from the 10x Genomics platform.
(6 stars) (1 fork) (0 issues indexadas) (0 good first issues abertas)
scCloud workflows
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Size-constrained Clustering in R
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statistical methods for analyzing single-cell RNA-seq data
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R/Rcpp implementation of the ScisTree algorithm
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slowkow/seoul256.vimVim Script
:deciduous_tree: Low-contrast Vim color scheme based on Seoul Colors
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R toolkit for single cell genomics
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Single-cell Interpretation via Multi-kernel Learning (R code in master branch, Matlab code in matlab branch), implementations of the method published in http://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.4207.html. Also see http://biorxiv.org/content/early/2017/03/21/118901 for a description of the software.
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slowkow/slowkow.comJavaScript
Personal website.
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slowkow/snakefilesPython
:snake: Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).
(95 stars) (36 forks) (0 issues indexadas) (0 good first issues abertas)
slowkow/snpbookJavaScript
:orange_book: Explore 1000 Genomes variant data with JavaScript.
(8 stars) (2 forks) (0 issues indexadas) (0 good first issues abertas)
:bar_chart: Identify cell types and pathways affected by genetic risk loci.
(37 stars) (9 forks) (0 issues indexadas) (0 good first issues abertas)
slowkow/soy-rtmsPerl
Computational analysis of retrotransposon-associated minisatellite DNAs in the soybean genome
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Efficient and precise single-cell reference atlas mapping with Symphony
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:dart: Human transcription factor target genes from 6 databases in convenient R format.
(87 stars) (19 forks) (0 issues indexadas) (0 good first issues abertas)