Other related work
Nobody has claimed this yet.
Assessment
- Difficulty
- 5/5
- Estimated time
- Over a week
- Newbie friendliness
- 20/100
- Issue type
- Feature
- Clarity
- Needs clarification
- Activity status
- Stale
- Tech stack
- r
- Domain
- bioinformatics
Research direction
Start by reading the two linked studies, including the Reactome-only analysis and the ComPath comparison of WikiPathways, Reactome, and KEGG. Investigate how the overlap coefficient could support the proposed pathway-resource comparison; no files, tests, or entry points are named, so the completion criteria need to be clarified.
Written by the indexing model from the issue text.
Description
Analysing the structure of pathways and its influence on the interpretation of biomedical datasets
- A Reactome only study
ComPath: An ecosystem for exploring, analyzing, and curating pathway
databases - Use the overlap coefficient
- Compares WikiPathways, Reactome and KEGG
- Dominant language
- R
- Stars
- 0
- Forks
- 0
- PR merge metrics
- No merged PRs in 30d
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
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