Can't start clickhouse on baremetal + sysbox

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#962 2025年8月29日に作成コメント 3 件リアクション 0 件担当者 1 名 GitHub で見る

@ctalledo がすでに取り組んでいます。

2025年8月29日から。

評価

この issue はまだ評価されていません。

説明

triaging

I borrowed an Debian 11, xeon amd64 baremetal server. I am trying to start clickhouse service in gitlab ci with sys box, but I can't. Also I can't start it manually with sys box. It start correctly Postgres or dind containers. Also clickhouse started correctly in default runc runner or in Virtual Machine with sysbox.
Strace of clickhouse:

futex(0x7fb05f822ae8, FUTEX_WAKE_PRIVATE, 12025.08.29 06:32:57.617101 [ 2857 ] {} <Trace> AsynchronousMetrics: Scanning /sys/class/thermal
) = 1
stat("/sys/class/thermal/thermal_zone0/temp", {st_mode=S_IFREG|0644, st_size=6, ...}) = 0
openat(AT_FDCWD, "/sys/class/thermal/thermal_zone0/temp", O_RDONLY|O_CLOEXEC) = 32
pread64(32, "45000\n", 4096, 0)         = 6
stat("/sys/class/thermal/thermal_zone1/temp", {st_mode=S_IFREG|0444, st_size=4096, ...}) = 0
openat(AT_FDCWD, "/sys/class/thermal/thermal_zone1/temp", O_RDONLY|O_CLOEXEC) = 33
pread64(33, "", 4096, 0)                = 0
close(33)                               = 0
close(32)                               = 0
close(31)                               = 0
close(30)                               = 0
close(29)                               = 0
close(27)                               = 0
close(28)                               = 0
close(22)                               = 0
close(21)                               = 0
close(20)                               = 0
close(25)                               = 0
close(19)                               = 0
close(18)                               = 0
close(24)                               = 0
close(23)                               = 0
close(26)                               = 0
close(17)                               = 0
close(16)                               = 0
getpid()                                = 2857
futex(0x7fb05f493e70, FUTEX_WAKE_PRIVATE, 1) = 1
futex(0x7fb05f493e80, FUTEX_WAKE_PRIVATE, 1) = 1
futex(0x7fb05f822c18, FUTEX_WAKE_PRIVATE, 1) = 1
futex(0x7fb05f822c28, FUTEX_WAKE_PRIVATE, 1) = 1
futex(0x7fb05f822b7c, FUTEX_WAKE_PRIVATE, 1) = 1
futex(0x7fb05f822b88, FUTEX_WAKE_PRIVATE, 1) = 1
futex(0x7fb05f822ad8, FUTEX_WAKE_PRIVATE, 1) = 1
futex(0x7fb05f822ae8, FUTEX_WAKE_PRIVATE, 12025.08.29 06:32:57.620140 [ 2857 ] {} <Information> Application: Waiting for background threads
) = 1
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---
futex(0x7fb02d200910, FUTEX_WAIT_BITSET|FUTEX_CLOCK_REALTIME, 2940, NULL, FUTEX_BITSET_MATCH_ANY) = ? ERESTARTSYS (To be restarted if SA_RESTART is set)
--- SIGWINCH {si_signo=SIGWINCH, si_code=SI_KERNEL} ---

In this part clickhouse stuck.
Logs of sys box:


Aug 29 07:53:37 systemd[1]: var-lib-sysboxfs-48080c882ed194ce37b35e954c96350359d4021ae04379d58289af88e17b6655.mount: Deactivated successfully.

Aug 29 07:53:38 sysbox-mgr[89293]: time="2025-08-29 07:53:38" level=info msg="unregistered container 48080c882ed1"

Aug 29 07:54:10 sysbox-mgr[89293]: time="2025-08-29 07:54:10" level=info msg="registered new container bff59f76bbf1"

Aug 29 07:54:10 sysbox-fs[89312]: time="2025-08-29 07:54:10" level=info msg="Container pre-registration completed: id = bff59f76bbf1"

Aug 29 07:54:10 sysbox-fs[89312]: time="2025-08-29 07:54:10" level=info msg="Container registration completed: id = bff59f76bbf1, initPid = 618625, uid:gid = 165536:165536"

Aug 29 07:55:35 sysbox-fs[89312]: time="2025-08-29 07:55:35" level=info msg="Container unregistration completed: id = bff59f76bbf1"

Aug 29 07:55:35 sysbox-mgr[89293]: time="2025-08-29 07:55:35" level=info msg="unregister bff59f76bbf1: chown rootfs overlayfs upper layer at /data/docker/overlay2/622027f0f5caead87951f664932d250e0e0f8e5248d120291f0b3e02b1812765/diff (165536 -> 0)"

Aug 29 07:55:35 systemd[1]: var-lib-sysboxfs-bff59f76bbf1d9a60bf847e0f0c80eb3981e98d090763e064442957a30a1baff.mount: Deactivated successfully.

Aug 29 07:55:36 sysbox-mgr[89293]: time="2025-08-29 07:55:36" level=info msg="unregistered container bff59f76bbf1"

Aug 29 07:55:55 sysbox-mgr[89293]: time="2025-08-29 07:55:55" level=info msg="registered new container 1a2e52bdc33c"

Aug 29 07:55:55 sysbox-fs[89312]: time="2025-08-29 07:55:55" level=info msg="Container pre-registration completed: id = 1a2e52bdc33c"

Aug 29 07:55:55 sysbox-fs[89312]: time="2025-08-29 07:55:55" level=info msg="Container registration completed: id = 1a2e52bdc33c, initPid = 620059, uid:gid = 165536:165536"

Aug 29 08:33:54 sysbox-mgr[89293]: time="2025-08-29 08:33:54" level=info msg="registered new container 090cde04e637"

Aug 29 08:33:54 sysbox-fs[89312]: time="2025-08-29 08:33:54" level=info msg="Container pre-registration completed: id = 090cde04e637"

Aug 29 08:33:54 sysbox-fs[89312]: time="2025-08-29 08:33:54" level=info msg="Container registration completed: id = 090cde04e637, initPid = 635229, uid:gid = 165536:165536"

Aug 29 08:40:25 systemd[1]: var-lib-sysboxfs-090cde04e63769ce8d068eccaf5078f6846909ffd40fb1a8513febcc8ce133be.mount: Deactivated successfully.

Aug 29 08:40:25 sysbox-fs[89312]: time="2025-08-29 08:40:25" level=info msg="Container unregistration completed: id = 090cde04e637"

Aug 29 08:40:25 sysbox-mgr[89293]: time="2025-08-29 08:40:25" level=info msg="unregister 090cde04e637: chown rootfs overlayfs upper layer at /data/docker/overlay2/8c33845fa43d78048962f9308710d5f94555e264569a32779ca5f0f74a140017/diff (165536 -> 0)"

Aug 29 08:40:25 sysbox-mgr[89293]: time="2025-08-29 08:40:25" level=info msg="unregistered container 090cde04e637"

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Shell/Bash の issue をもっと見る

Can't start clickhouse on baremetal + sysbox

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評価

説明

環境構築

はじめの一歩

nestybox/sysbox のほかの issue

何か問題がありますか？

何か問題がありますか？

何か問題がありますか？

何か問題がありますか？

何か問題がありますか？

似ている issue

何か問題がありますか？

何か問題がありますか？

何か問題がありますか？

何か問題がありますか？

何か問題がありますか？

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