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slowkow/rapids-single-cell-examplesJupyter Notebook

Examples of single-cell genomic analysis accelerated with RAPIDS

Ultimo commit 28 set 2020

 (0 star) (1 fork) (0 issue indicizzate) (0 good first issue aperte)
slowkow/rcpp-galleryC++

Source code for the Rcpp Gallery website

Ultimo commit 4 mag 2018

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slowkow/regl-scatterplotJavaScript

Scalable WebGL-based scatter plot library build with Regl

Ultimo commit 5 feb 2026

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slowkow/remotecopyPerl

Copy from your terminal into your local clipboard.

Ultimo commit 9 mar 2014

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slowkow/revdepcheckR

R package reverse dependency checking

Ultimo commit 3 ott 2025

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slowkow/saturationR

:sponge: Estimate sequencing saturation for GEX, VDJ, and ADT data from the 10x Genomics platform.

Ultimo commit 13 apr 2023

 (6 star) (1 fork) (0 issue indicizzate) (0 good first issue aperte)
slowkow/scCloudWDL

scCloud workflows

Ultimo commit 18 set 2019

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slowkow/scclust-RC

Size-constrained Clustering in R

Ultimo commit 24 ago 2018

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slowkow/scdeR

statistical methods for analyzing single-cell RNA-seq data

Ultimo commit 12 gen 2017

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slowkow/scistreerR

R/Rcpp implementation of the ScisTree algorithm

Ultimo commit 15 giu 2023

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slowkow/seoul256.vimVim Script

:deciduous_tree: Low-contrast Vim color scheme based on Seoul Colors

Ultimo commit 5 set 2017

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slowkow/seuratR

R toolkit for single cell genomics

Ultimo commit 18 lug 2020

 (1 star) (1 fork) (0 issue indicizzate) (0 good first issue aperte)
slowkow/slowkow

Ultimo commit 2 apr 2024

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slowkow/slowkow.comJavaScript

Personal website.

Ultimo commit 8 ago 2025

 (3 star) (2 fork) (0 issue indicizzate) (0 good first issue aperte)
slowkow/snakefilesPython

:snake: Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).

Ultimo commit 18 lug 2017

 (95 star) (36 fork) (0 issue indicizzate) (0 good first issue aperte)
slowkow/snpbookJavaScript

:orange_book: Explore 1000 Genomes variant data with JavaScript.

Ultimo commit 14 set 2018

 (8 star) (2 fork) (0 issue indicizzate) (0 good first issue aperte)
slowkow/snpseaC++

:bar_chart: Identify cell types and pathways affected by genetic risk loci.

Ultimo commit 29 feb 2024

 (37 star) (9 fork) (0 issue indicizzate) (0 good first issue aperte)
slowkow/soy-rtmsPerl

Computational analysis of retrotransposon-associated minisatellite DNAs in the soybean genome

Ultimo commit 11 apr 2012

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slowkow/symphonyR

Efficient and precise single-cell reference atlas mapping with Symphony

Ultimo commit 15 gen 2021

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slowkow/tftargetsR

:dart: Human transcription factor target genes from 6 databases in convenient R format.

Ultimo commit 2 mag 2017

 (87 star) (19 fork) (0 issue indicizzate) (0 good first issue aperte)