Dépôts
Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.
Rust coder/decoder for Nucleotide Archival Format (NAF) files.
A memory-optimized wrapper for Python sets likely to be empty.
Rust parser combinator framework
GUI for monitoring NVIDIA GPU (adapted from bbswitch-gui)
Structures to deserialize OBO Foundry listings into.
SIMD C/C++ library for massive optimal sequence alignment (local/SW, infix, overlap, global)
OpenTTD is an open source simulation game based upon Transport Tycoon Deluxe
Read optical media filesystems with Rust
A Platform-Accelerated Package for Alignment-free SMURF analysis.
Physicochemical properties, indices and descriptors for amino-acid sequences.
Prodigal Gene Prediction Software
A Python frontend to (Open Biomedical) Ontologies.
A (better) decorator for caching properties in classes (forked from cached-property).
Chemical structure generation for protein sequences as SMILES string.
Redundancy checks in pure Rust
Rust data structures and client for the PubChem REST API
Pure Python port and interface to ABRicate, a tool for mass screening of contigs for antimicrobial resistance or virulence genes.
Cython bindings and Python interface to ARAGORN, a (t|mt|tm)RNA gene finder.