nf-core/crisprvarNextflow
[WIP] Evaluate outcomes from genome editing experiments
(5 Stars) (5 Forks) (0 indexierte Issues) (0 offene good first issues)
Repositories
nf-core Repositories
nf-core/deepmodeloptimNextflow
Stochastic Testing and Input Manipulation for Unbiased Learning Systems
(31 Stars) (15 Forks) (6 indexierte Issues) (6 offene good first issues)
nf-core/deepvariantNextflow
Please consider using/contributing to https://github.com/nf-core/sarek
(41 Stars) (26 Forks) (4 indexierte Issues) (4 offene good first issues)
nf-core/genomeqcNextflow
Compare the quality of multiple genomes, along with their annotations.
(24 Stars) (24 Forks) (3 indexierte Issues) (1 offenes good first issue)
nf-core/hlatypingNextflow
Precision HLA typing from next-generation sequencing data
(81 Stars) (37 Forks) (0 indexierte Issues) (0 offene good first issues)
nf-core/kmermaidNextflow
k-mer similarity analysis pipeline
(24 Stars) (16 Forks) (0 indexierte Issues) (0 offene good first issues)
nf-core/pathogensurveillanceNextflow
Surveillance of pathogens using population genomics and sequencing
(61 Stars) (9 Forks) (3 indexierte Issues) (1 offenes good first issue)
nf-core/proteinannotatorNextflow
Generation of sequence-level annotations for amino acid sequences
(14 Stars) (13 Forks) (0 indexierte Issues) (0 offene good first issues)
nf-core/sarekNextflow
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
(589 Stars) (539 Forks) (6 indexierte Issues) (6 offene good first issues)
nf-core/variantprioritizationNextflow
Bioinformatics analysis pipeline for the functional annotation and translation of somatic SNVs/InDels and copy number abberations for precision cancer medicine using Personal Cancer Genome Reporter (PCGR). The pipeline offers germline SNVs/INDELS intepretation and annotation using Cancer Predisposition Sequencing Reporter (CPSR).
(15 Stars) (12 Forks) (0 indexierte Issues) (0 offene good first issues)