Code to reproduce analyses of mouse cortical gradients
Repositories
benfulcher repositories
Code for computing interareal axonal connectivity in mouse
Pre-print at: http://biorxiv.org/content/early/2016/11/26/089219
C++ library for simulation of multiscale neural field dynamics
Timeseries analysis for neuroscience data
Matlab code for the nonlinearity measure L through nsAMDF (nonlinear average magnitude difference function)
Python bindings to interesting matlab libraries for data analysis
Code for processing and analysis of resting state fMRI
This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in "On testing for spatial correspondence between maps of human brain structure and function," Alexander-Bloch et al., NeuroImage, 2018. See Wiki for a selection of other papers that use this code.
PHYS3934
Generate surrogate maps (code from Josh Burt)
The Virtual Brain scientific library. Requires external_geodesic_library