Required field 'num_values' was not found in serialized data!
Nobody has claimed this yet.
Assessment
- Difficulty
- 5/5
- Estimated time
- Over a week
- Newbie friendliness
- 20/100
- Issue type
- Bug
- Clarity
- Needs clarification
- Activity status
- Stale
- Tech stack
- java
- Domain
- data-engineering
Research direction
Start with the reported stack trace, especially VectorizedParquetReader.java, ParquetFileReader, and the Thrift DataPageHeader parsing path. Reproduce the failure with the affected Parquet file if available, then determine whether the reader or serialized data is at fault; done means a confirmed diagnosis and a focused regression test or documented explanation.
Written by the indexing model from the issue text.
Description
Describe the bug, including details regarding any error messages, version, and platform.
When using iceberg, we encountered a situation where a parquet file we wrote could not be read. When reading, the following error message appeared. Judging from the exception information, it is speculated that the parquet file is damaged or has not been written properly and cannot be parsed. We have also tried a variety of parsing tools but cannot parse it normally. However, the footer of the file is normal and the schema information of the file can be obtained, but the read data cannot be parsed the DataPageHeader. parquet version is 1.13.1. Is there any tool that can restore damaged files?
org.apache.iceberg.exceptions.RuntimeIOException: java.io.IOException: can not read class org.apache.iceberg.shaded.org.apache.parquet.format.PageHeader: Required field 'num_values' was not found in serialized data! Struct: org.apache.iceberg.shaded.org.apache.parquet.format.DataPageHeader$DataPageHeaderStandardScheme@57eb7595
at org.apache.iceberg.parquet.VectorizedParquetReader$FileIterator.advance(VectorizedParquetReader.java:165)
at org.apache.iceberg.parquet.VectorizedParquetReader$FileIterator.next(VectorizedParquetReader.java:141)
at org.apache.iceberg.spark.source.BaseReader.next(BaseReader.java:130)
at org.apache.spark.sql.execution.datasources.v2.PartitionIterator.hasNext(DataSourceRDD.scala:93)
at org.apache.spark.sql.execution.datasources.v2.MetricsIterator.hasNext(DataSourceRDD.scala:130)
at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
at scala.collection.Iterator$$anon$10.hasNext(Iterator.scala:460)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage5.columnartorow_nextBatch_0$(Unknown Source)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage5.agg_doAggregateWithKeys_0$(Unknown Source)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage5.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:759)
at scala.collection.Iterator$$anon$10.hasNext(Iterator.scala:460)
at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:140)
at org.apache.spark.shuffle.ShuffleWriteProcessor.write(ShuffleWriteProcessor.scala:59)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:99)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:52)
at org.apache.spark.scheduler.Task.run(Task.scala:131)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:506)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1501)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:509)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:750)
Caused by: java.io.IOException: can not read class org.apache.iceberg.shaded.org.apache.parquet.format.PageHeader: Required field 'num_values' was not found in serialized data! Struct: org.apache.iceberg.shaded.org.apache.parquet.format.DataPageHeader$DataPageHeaderStandardScheme@57eb7595
at org.apache.iceberg.shaded.org.apache.parquet.format.Util.read(Util.java:366)
at org.apache.iceberg.shaded.org.apache.parquet.format.Util.readPageHeader(Util.java:133)
at org.apache.iceberg.shaded.org.apache.parquet.hadoop.ParquetFileReader$Chunk.readPageHeader(ParquetFileReader.java:1458)
at org.apache.iceberg.shaded.org.apache.parquet.hadoop.ParquetFileReader$Chunk.readAllPages(ParquetFileReader.java:1505)
at org.apache.iceberg.shaded.org.apache.parquet.hadoop.ParquetFileReader$Chunk.readAllPages(ParquetFileReader.java:1478)
at org.apache.iceberg.shaded.org.apache.parquet.hadoop.ParquetFileReader.readChunkPages(ParquetFileReader.java:1088)
at org.apache.iceberg.shaded.org.apache.parquet.hadoop.ParquetFileReader.internalReadRowGroup(ParquetFileReader.java:956)
at org.apache.iceberg.shaded.org.apache.parquet.hadoop.ParquetFileReader.readNextRowGroup(ParquetFileReader.java:909)
at org.apache.iceberg.parquet.VectorizedParquetReader$FileIterator.advance(VectorizedParquetReader.java:163)
... 23 more
Caused by: org.apache.iceberg.shaded.org.apache.parquet.shaded.org.apache.thrift.protocol.TProtocolException: Required field 'num_values' was not found in serialized data! Struct: org.apache.iceberg.shaded.org.apache.parquet.format.DataPageHeader$DataPageHeaderStandardScheme@57eb7595
at org.apache.iceberg.shaded.org.apache.parquet.format.DataPageHeader$DataPageHeaderStandardScheme.read(DataPageHeader.java:781)
at org.apache.iceberg.shaded.org.apache.parquet.format.DataPageHeader$DataPageHeaderStandardScheme.read(DataPageHeader.java:719)
at org.apache.iceberg.shaded.org.apache.parquet.format.DataPageHeader.read(DataPageHeader.java:624)
at org.apache.iceberg.shaded.org.apache.parquet.format.PageHeader$PageHeaderStandardScheme.read(PageHeader.java:1072)
at org.apache.iceberg.shaded.org.apache.parquet.format.PageHeader$PageHeaderStandardScheme.read(PageHeader.java:1025)
at org.apache.iceberg.shaded.org.apache.parquet.format.PageHeader.read(PageHeader.java:902)
at org.apache.iceberg.shaded.org.apache.parquet.format.Util.read(Util.java:363)
... 31 more
Component(s)
Thrift
- Dominant language
- Java
- Stars
- 3.1k
- Forks
- 1.6k
- Avg merge
- 6d 16h
- Merged PRs (30d)
- 36
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