Problem in cnetplot visualisation
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Assessment
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Newbie friendliness
- 25/100
- Issue type
- Bug
- Clarity
- Needs clarification
- Activity status
- Stale
- Tech stack
- r
- Domain
- data-visualization
Research direction
Start by reproducing the two cnetplot calls in the R Markdown workflow with showCategory set to 2 and 3. Capture the exact error and compare the resulting visualisations; the issue is complete when the inconsistent behaviour is explained or corrected and the reproduction details are documented.
Written by the indexing model from the issue text.
Description
I used two different showCategories numbers
Type-1
cnetplot(xx1,pie="count", cex_category=1.5, layout="kk", showCategory = 2, label_style="ggforce", shadowtext = FALSE, cex_label_category = 1.25, cex_label_gene = 1, legend_n=3)
Type-2
cnetplot(xx1,pie="count", cex_category=1.5, layout="kk", showCategory = 3, label_style="ggforce", shadowtext = FALSE, cex_label_category = 1.25, cex_label_gene = 1, legend_n=3)
Using Rscript, I run the .Rmd file, this error is consistent consistent
- Dominant language
- R
- Stars
- 260
- Forks
- 75
- PR merge metrics
- No merged PRs in 30d
Contributor guide
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