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如何调整Biomarker可视化过程中,显示label的数量

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#94 3 comments 0 reactions 0 assignees View on GitHub

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Assessment

Difficulty
3/5
Estimated time
1-2 days
Newbie friendliness
35/100
Issue type
Feature
Clarity
Mostly clear
Activity status
Stale
Tech stack
r

Research direction

Start with the R plotting block shown in the issue, especially the td_filter(nodeClass == "Phylum") data passed to geom_hilight. Determine how the phylum abundance ranking and the requested top-ten-plus-other display should be represented, then verify that the resulting visualization shows only those labels.

Written by the indexing model from the issue text.

Description

老师好,我想知道在这一步该怎么调整label的数量,调整成显示丰度前10的门,其余可以合并为other之类的显示格式

display the high light of phylum clade.

p2 <- p1 +
geom_hilight(
data = td_filter(nodeClass == "Phylum"),
mapping = aes(node = node, fill = label)
)

我在可视化自己的数据,这一步显示出来的门太多了

Dominant language
R
Stars
195
Forks
36
PR merge metrics
No merged PRs in 30d

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