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py3Dmol widgets not working

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Assessment

Difficulty
4/5
Estimated time
3-5 days
Newbie friendliness
25/100
Issue type
Bug
Clarity
Needs clarification
Activity status
Stale
Tech stack
jupyter, jupyter-notebook, python
Domain
documentation

Research direction

Start by running the creating_networks_from_external_files notebook from a fresh install and reproduce the error at the interact(display_edge, index=widgets.IntSlider(...)) entry point. Inspect the notebook's widget and py3Dmol setup, then verify that the edge slider displays the expected widget without an error.

Written by the indexing model from the issue text.

Description

On a fresh install I get the below in the creating_networks_from_external_files notebook

# traverse through all views

edges = list(ligand_network.edges)

interact(display_edge, index=widgets.IntSlider(min=0, max=len(edges)-1, step=1))

>>> Error displaying widget

<function __main__.display_edge(index)>
Dominant language
Jupyter Notebook
Stars
70
Forks
15
Avg merge
4d 11h
Merged PRs (30d)
4

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