Repositories

OHDSI repositories

7 supported repositories

A tool to help improve data quality standards in observational data science.

Last commit May 18, 2026

 (179 stars) (107 forks) (0 indexed issues) (0 open good first issues)

An R package for connecting to databases using JDBC.

Last commit Jul 14, 2026

 (57 stars) (91 forks) (5 indexed issues) (5 open good first issues)

MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitted to critical care units at a large tertiary care hospital. This repository contains the ETL to the OMOP CDM.

Last commit Oct 20, 2025

 (91 stars) (36 forks) (0 indexed issues) (0 open good first issues)

An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

Last commit Jul 23, 2026

 (219 stars) (94 forks) (1 indexed issue) (1 open good first issue)

Last commit May 6, 2026

 (0 stars) (1 fork) (0 indexed issues) (0 open good first issues)

WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an ETL. It comes with RabbitInAHat, an application for interactive design of an ETL to the OMOP Common Data Model with the help of the the scan report generated by White Rabbit.

Last commit Dec 25, 2025

 (222 stars) (102 forks) (8 indexed issues) (8 open good first issues)

A framework for interacting with gaiaDB - part of the OHDSI GIS Gaia toolchain

Last commit Apr 17, 2026

 (4 stars) (3 forks) (7 indexed issues) (7 open good first issues)