Hacktoberfest 2026: the issues maintainers tagged for October, open and beginner-friendly. Browse Hacktoberfest issues

some issues running test-suite-upload-from-sciunit.ipynb

Open
#39 10 comments 0 reactions 1 assignee View on GitHub

@NeZanyat is already working on this.

Since Nov 6, 2018.

Assessment

This issue has not been assessed yet.

Description

I encountered the following issues running test-suite-upload-from-sciunit.ipynb.
(I was using dev branch for sciunit and I saw it has substantial changes compared to master, so It would be a good idea to revisit this example ones the dev branch PR is merged)

in [22] -> models[1].set_attrs({'izhikevich2007Cell':{'a':'0.04 per_ms'}})

  File "test_suit.py", line 19, in <module>
    models[1].set_attrs({'izhikevich2007Cell':{'a':'0.04 per_ms'}})
TypeError: set_attrs() takes 1 positional argument but 2 were given

workaround : remove attr

in [34] -> test2 = AnotherTest(observation={'mean':3, 'std':8, ...)

NameError: name 'AnotherTest' is not defined

So, replace AnotherTest with TestFromJupyterNotebook()

in [39] -> responses = client_instance.upload_suite_score(suite, score_matrix)

ERROR:scidash_api.mapper:CLIENT -> INVALID DATA: {'sort_key': ['required field']}

Workaround: adding keys manually.

in [39] -> responses = client_instance.upload_suite_score(suite, score_matrix)

{'errors': {'model_instance': {'run_params': ['Not a valid string.']}, 'score_class': {'url': ['Enter a valid URL.']}}, 'success': False}
Dominant language
Jupyter Notebook
Stars
2
Forks
3
PR merge metrics
No merged PRs in 30d

Getting set up

This project ships no dev container, Dockerfile or contributing guide, so setting up is up to you: start from its README, and see our first-contribution guide for the general steps.

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

More from MetaCell/scidash-api

All issues in MetaCell/scidash-api

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.