provenance standards
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Nobody has claimed this yet.
Assessment
- Difficulty
- 5/5
- Estimated time
- Over a week
- Newbie friendliness
- 35/100
- Issue type
- Feature
- Clarity
- Mostly clear
- Activity status
- Quiet
- Tech stack
- r
- Domain
- data-engineering
Research direction
Start by inspecting inst/extdata/merfish.zarr and its zmetadata, then compare the available experiment metadata across the package's data artifacts. The issue calls for agreeing on a minimal provenance standard and checking artifacts for compliance; done means the standard is defined and all data artifacts can be checked against it.
Written by the indexing model from the issue text.
Description
The merfish.zarr in inst/extdata has zmetadata but I do not see anything that would constitute experiment metadata -- what is the source, what version of platform, etc. Can we state a minimal standard for experiment provenance and ensure that all
our data artifacts can be checked for compliance?
- Dominant language
- R
- Stars
- 37
- Forks
- 10
- Avg merge
- 22h 46m
- Merged PRs (30d)
- 20
Getting set up
- No Dockerfile or Docker Compose file
- No pull request template
- Read the contributing guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
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