GuangchuangYu repositories

Last commit Feb 4, 2015

Background information about me.

Last commit Dec 30, 2024

Guangchuang's blog

Last commit Dec 20, 2021

This is a XeLatex template for PhD students of The University of Hong Kong.

Last commit May 10, 2016

Port of the classic Octopress theme to Hugo

Last commit Mar 23, 2017

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

Last commit Sep 20, 2017

phylogenetic placement format (jplace) exporter

Last commit Dec 22, 2016

Analyses of MERS-CoV outbreaks

Last commit Jul 31, 2015

Does MERS-CoV recombine?

Last commit Oct 28, 2015

Code accompanying the book "Machine Learning for Hackers"

Last commit Mar 17, 2012

MetaMicrobiome: an R package for the meta-analysis and visualization of microbiome.

Last commit Jan 16, 2019

Code and data for Spielman and Wilke, The relationship between dN/dS and scaled selection coefficients, Mol. Biol. Evol. 2015.

Last commit Jan 5, 2015

My solutions to Robert Sedgewick's fantastic Princeton courses on Algorithms/Data Structures (http://algs4.cs.princeton.edu/home/) and Intro to Programming in Java (http://introcs.cs.princeton.edu/java/home/)

Last commit Nov 10, 2014

Info and materials for the RevBayes workshop held at NIMBioS

Last commit Aug 11, 2017

Some string algorithms, from Dan Gusfield's "Algorithms on Strings, Trees and Sequences" and elsewhere

Last commit Feb 11, 2015

Last commit Nov 21, 2019

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

Last commit Apr 24, 2018

An R package for making antibody landscapes

Last commit Jun 17, 2019

Repository for course materials for the antigenic cartography and antibody landscapes course 2019

Last commit Jun 14, 2019

analysis of phylogenetics and evolution

Last commit May 4, 2021