Definition from ontologies
Nobody has claimed this yet.
Assessment
- Difficulty
- 5/5
- Estimated time
- Over a week
- Newbie friendliness
- 35/100
Research direction
Start by locating odml.Section's handling of the reference and definition arguments. Investigate the linked G-Node OEN ontology URL and how its section and property information could be read. Done means supplying an ontology reference automatically populates sec.definition, matching the example behavior.
Written by the indexing model from the issue text.
Description
It would be great if the definition of an object is automatic set when an ontology reference is given.
We could test this functionality with the G-Node OEN which should already contain the (one layer) sections and corresponding properties of the odML terminologies.
Example:
ontology_url = "http://purl.org/incf/ontology/ExperimentalNeurophysiology/oen_term.owl/oen_0000442"
sec = odml.Section("MySubject", type="subject", reference=ontology_url) # or url to
sec.definition
# printout: "The investigated experimental subject (animal or person). May contain the Cell and Preparation sections as subsections."
- Dominant language
- Python
- Stars
- 25
- Forks
- 30
- PR merge metrics
- No merged PRs in 30d
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
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