only 71 lines and truncated
Nobody has claimed this yet.
Assessment
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Newbie friendliness
- 25/100
- Issue type
- Bug
- Clarity
- Needs clarification
- Activity status
- Stale
- Tech stack
- c
- Domain
- bioinformatics
Research direction
Start by reproducing the ADMIXTOOLS run and examining the full output around the reported truncation. Trace where the output is read and where the truncation error is raised; done means identifying why this output is treated as truncated and confirming the complete output is handled correctly.
Written by the indexing model from the issue text.
Description
53 result: 6090 6448 6452 -0.050620 0.002299 -22.016 5286397
54 result: 6090 6448 6461-1 -0.072949 0.002442 -29.879 6702326
55 result: 6090 6448 CM4 0.142382 0.004340 32.804 11238517
56 result: 6090 6448 CM5 -0.011094 0.001282 -8.657 14107468
57 result: 6090 6448 CM6X-1 -0.010316 0.001297 -7.955 14025899
58 result: 6090 6448 CM6X-2 -0.009607 0.001480 -6.493 13522309
59 no data 6090 6452 6090 0.000000 -1.000000 -0.000 -1
60 result: 6090 6452 6091-1 -0.068837 0.001360 -50.598 4575512
61 result: 6090 6452 6091-5 -0.069845 0.001385 -50.438 4799786
62 result: 6090 6452 6448 -0.066545 0.002332 -28.530 5286397
63 no data 6090 6452 6452 0.000000 -1.000000 -0.000 -1
64 result: 6090 6452 6461-1 -0.070795 0.002246 -31.514 5269160
65 result: 6090 6452 CM4 0.116291 0.003947 29.467 8554140
66 result: 6090 6452 CM5 -0.015177 0.001211 -12.528 10637782
67 result: 6090 6452 CM6X-1 -0.014377 0.001229 -11.700 10570454
68 result: 6090 6452 CM6X-2 -0.014060 0.001399 -10.052 10209026
69 no data 6090 6461-1 6090 0.000000 -1.000000 -0.000 -1
70 result: 6090 6461-1 6091-1 -0.063507 0.001388 -45.739 5923807
71 result: 6090 6461-1 6091-5 -0.064260 0.001393 -46.131 6208487
72
73 ==================================================
74 END OF OUTPUT FILE
75
76
77 Error: The output file we got from ADMIXTOOLS is truncated.
78 Please examine the full output above and check for errors.
79 Execution halted
- Dominant language
- C
- Stars
- 235
- Forks
- 76
- PR merge metrics
- No merged PRs in 30d
Getting set up
This project ships no dev container, Dockerfile or contributing guide, so setting up is up to you: start from its README, and see our first-contribution guide for the general steps.
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
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