Geno to VCF conversion
Nobody has claimed this yet.
Assessment
- Difficulty
- 5/5
- Estimated time
- Over a week
- Newbie friendliness
- 20/100
- Issue type
- Documentation
- Clarity
- Needs clarification
- Activity status
- Stale
- Domain
- bioinformatics
Research direction
Start with the attached sample_data.zip and inspect the repository for any existing Geno or VCF conversion entry points or guidance. Clarify whether the expected outcome is documentation or a code change; done should be a documented, reproducible conversion path for the supplied sample data.
Written by the indexing model from the issue text.
Description
Hi, I have some data from David Reich Lab. I want to convert it into VCF file. Could you please guide me how can I do this. Here I attached a sample dataset.
Thanks in anticipation.
- Dominant language
- C
- Stars
- 235
- Forks
- 76
- PR merge metrics
- No merged PRs in 30d
Getting set up
This project ships no dev container, Dockerfile or contributing guide, so setting up is up to you: start from its README, and see our first-contribution guide for the general steps.
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
More from DReichLab/AdmixTools
-
Difficulty 5/5 Over a week Newbie friendliness 35/100
DReichLab/AdmixTools#125 · 7 comments ·
-
Difficulty 4/5 3-5 days Newbie friendliness 25/100
DReichLab/AdmixTools#123 · 2 comments ·
-
Difficulty 5/5 Over a week Newbie friendliness 20/100
DReichLab/AdmixTools#122 · 2 comments ·
-
Difficulty 4/5 3-5 days Newbie friendliness 25/100
DReichLab/AdmixTools#121 · 1 comment ·
-
Difficulty 4/5 3-5 days Newbie friendliness 25/100
DReichLab/AdmixTools#117 · 3 comments ·
All issues in DReichLab/AdmixTools
Similar issues
-
type: feature
Difficulty 1/5 Under an hour Newbie friendliness 77/100
-
Difficulty 2/5 1-3 hours Newbie friendliness 83/100
Maintainers usually reply within 1 day
-
Difficulty 2/5 1-3 hours Newbie friendliness 78/100
FujiNetWIFI/fujinet-firmware#1932 ·
Maintainers usually reply within 1 day
-
Difficulty 2/5 1-3 hours Newbie friendliness 63/100
Maintainers usually reply within 1 day
-
stdlib
Difficulty 2/5 1-3 hours Newbie friendliness 68/100