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BiocManager::repositories() Reports Missing `books` for 3.15/3.16

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#135 9 comments 0 reactions 0 assignees View on GitHub

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Assessment

Difficulty
3/5
Estimated time
1-2 days
Newbie friendliness
35/100
Issue type
Bug
Clarity
Mostly clear
Activity status
Stale
Tech stack
r
Domain
tooling

Research direction

Start by reproducing BiocManager::repositories() with Bioconductor 3.15 and 3.16, then inspect the repository configuration that adds the reported book entry. Done means the command no longer reports a repository that is absent from bioconductor.org, with behavior verified for both versions.

Written by the indexing model from the issue text.

Description

When using Bioconductor 3.15 or 3.16, the command BiocManager::repositories() reports that the book repository is available, but the repository does not appear to exist on bioconductor.org.

Dominant language
R
Stars
76
Forks
29
PR merge metrics
No merged PRs in 30d

Getting set up

This project ships no dev container, Dockerfile or contributing guide, so setting up is up to you: start from its README, and see our first-contribution guide for the general steps.

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

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