nf-core/crisprvarNextflow
[WIP] Evaluate outcomes from genome editing experiments
(5 stars) (5 forks) (0 个已索引 issue) (0 个开放 good first issue)
仓库
nf-core 的仓库
nf-core/deepmodeloptimNextflow
Stochastic Testing and Input Manipulation for Unbiased Learning Systems
(31 stars) (15 forks) (6 个已索引 issue) (6 个开放 good first issue)
nf-core/deepvariantNextflow
Please consider using/contributing to https://github.com/nf-core/sarek
(41 stars) (26 forks) (4 个已索引 issue) (4 个开放 good first issue)
nf-core/genomeqcNextflow
Compare the quality of multiple genomes, along with their annotations.
(24 stars) (24 forks) (3 个已索引 issue) (1 个开放 good first issue)
nf-core/hlatypingNextflow
Precision HLA typing from next-generation sequencing data
(81 stars) (37 forks) (0 个已索引 issue) (0 个开放 good first issue)
nf-core/kmermaidNextflow
k-mer similarity analysis pipeline
(24 stars) (16 forks) (0 个已索引 issue) (0 个开放 good first issue)
nf-core/pathogensurveillanceNextflow
Surveillance of pathogens using population genomics and sequencing
(61 stars) (9 forks) (3 个已索引 issue) (1 个开放 good first issue)
nf-core/proteinannotatorNextflow
Generation of sequence-level annotations for amino acid sequences
(14 stars) (13 forks) (0 个已索引 issue) (0 个开放 good first issue)
nf-core/sarekNextflow
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
(589 stars) (539 forks) (6 个已索引 issue) (6 个开放 good first issue)
nf-core/variantprioritizationNextflow
Bioinformatics analysis pipeline for the functional annotation and translation of somatic SNVs/InDels and copy number abberations for precision cancer medicine using Personal Cancer Genome Reporter (PCGR). The pipeline offers germline SNVs/INDELS intepretation and annotation using Cancer Predisposition Sequencing Reporter (CPSR).
(15 stars) (12 forks) (0 个已索引 issue) (0 个开放 good first issue)