nextflow-io/nextflow

Cumulative job duration (realtime) in the nextflow execution report

Open

#6,298 创建于 2025年7月22日

在 GitHub 查看
 (0 评论) (0 反应) (0 负责人)Groovy (784 fork)batch import
good first issuestale

仓库指标

Star
 (3,382 star)
PR 合并指标
 (平均合并 3天 18小时) (30 天内合并 38 个 PR)

描述

New feature

The nextflow execution report is a very helpful tool for profiling pipeline performance and resource allocation. The current report describes well the per-process distribution of runtimes, but does not report the cumulative realtime duration by process.

Use case

I have some process which run in reasonable amount of time, but are executed many thousands of times, leading to very large cumulative runtimes. These processes are great candidates for performance optimization, but do not stand out in the current report.

Suggested implementation

I currently derive this from the trace file, but it would be right at home as a cumulative runtime bar plot in a separate tab of the Job Duration section of the execution report.

贡献者指南