nextflow-io/nextflow

In summary report, allow breakdowns by sub-workflow for processes

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#4,751 建立於 2024年2月16日

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 (2 留言) (0 反應) (0 負責人)Groovy (3,382 star) (784 fork)batch import
good first issuestale

描述

New feature

I would like to request a (static) config option, or perhaps a (dynamic) toggle in the interactive plotly figures to allow me to de-aggregate process resource reports based on which sub-workflows they were executed under.

Usage scenario

I re-use the same process definitions in different sub-workflows in my main nextflow workflow (see https://github.com/nextflow-io/nextflow/discussions/4750 for more on this). When I look at the resulting "Nextflow Workflow Report" all the processes are aggregated together in the figures.

Suggest implementation

It appears this information is available inside the existing report data, as in the table at the end, processes are labelled <NAMED_SUB_WORKFLOW>:<DEEPER_NAMED_SUBWORKFLOW>:<PROCESS>. Breaking down the data using the subworkflow labels should thus be fairly easy.

貢獻者指南

技術棧
無
領域
analytics
議題類型
feature
難度面向新貢獻者的預計實作難度，1 表示很小改動，5 表示專家級工作。
3
預計時間有經驗貢獻者完成調查、實作、測試並準備 pull request 的粗略時間範圍。
1-3 hours
活動狀態議題目前的可參與程度：新鮮、活躍、陳舊、阻塞或等待維護者輸入。
fresh
清晰度議題是否清楚說明預期改動、驗收標準和下一步。
clear
前置要求
Nextflow workflow conceptsReport generation basics
新手友善度1-100 的估計分數，表示該議題對首次貢獻者的友善程度。
65
研究方向
Investigate the report generation code in the Nextflow repository, particularly the part that creates the resource report figures. Look for where process data is aggregated and how the sub workflow labels are already present in the table data. Consider adding a config option or toggle to split the aggregation by sub workflow.