tldr-pages/tldr

Page request: snakemake

Open

#12,366 opened on Feb 25, 2024

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 (1 comment) (0 reactions) (0 assignees)Markdown (5,381 forks)batch import
help wantednew command

Repository metrics

Stars
 (63,468 stars)
PR merge metrics
 (PR metrics pending)

Description

Command description

The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language.

Command details

No response

Documentation

https://snakemake.readthedocs.io/en/stable/

Platform

Common

VCS repository link (e.g. GitHub, GitLab)

https://github.com/snakemake/snakemake

Additional information

Much used in bioinformatics, 2k Github stars

Contributor guide

Research direction
Review existing tldr page format and Snakemake documentation to create a concise cheatsheet.
Tech stack
python
Domain
documentation
Issue type
Documentation
DifficultyEstimated implementation difficulty for a new contributor, from 1 for very small changes to 5 for expert-level work.
1
Estimated timeA rough time range for an experienced contributor to investigate, implement, test, and prepare a pull request.
Under 1 hour
Activity statusHow available the issue appears right now: fresh, active, stale, blocked, or waiting on maintainer input.
Active
ClarityHow clearly the issue explains the expected change, acceptance criteria, and next step.
Clear
Prerequisites
Git
Newbie friendlinessA 1-100 score estimating how approachable this issue is for first-time contributors.
95