sanger-tol/sequencecomposition

TRASH (Tandem Repeat Annotation and Structural Hierarchy)

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#4 opened on Jun 23, 2023

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 (1 comment) (0 reactions) (0 assignees)Nextflow (3 forks)auto 404
help wanteduser request

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Description

Description of feature

Add TRASH (Tandem Repeat Annotation and Structural Hierarchy) into the pipeline

Contributor guide

Research direction
Explore the Nextflow pipeline structure, identify how existing tools are added (e.g., via modules/processes), and review the TRASH repository to understand its dependencies and usage. Then propose a plan to integrate TRASH into the workflow.
Tech stack
groovy
Domain
data
Issue type
Feature
DifficultyEstimated implementation difficulty for a new contributor, from 1 for very small changes to 5 for expert-level work.
3
Estimated timeA rough time range for an experienced contributor to investigate, implement, test, and prepare a pull request.
1-2 days
Activity statusHow available the issue appears right now: fresh, active, stale, blocked, or waiting on maintainer input.
Active
ClarityHow clearly the issue explains the expected change, acceptance criteria, and next step.
Mostly clear
Prerequisites
GitNextflow
Newbie friendlinessA 1-100 score estimating how approachable this issue is for first-time contributors.
65