Repositórios

Repositórios de nf-core

10 repositórios suportados

Mostrar repositórios com issues indexadas
nf-core/crisprvarNextflow

[WIP] Evaluate outcomes from genome editing experiments

Último commit 10 de jul. de 2019

 (5 stars) (5 forks) (0 issues indexadas) (0 good first issues abertas)
nf-core/deepmodeloptimNextflow

Stochastic Testing and Input Manipulation for Unbiased Learning Systems

Último commit 30 de abr. de 2026

 (31 stars) (15 forks) (6 issues indexadas) (6 good first issues abertas)
nf-core/deepvariantNextflow

Please consider using/contributing to https://github.com/nf-core/sarek

Último commit 13 de jul. de 2021

 (41 stars) (26 forks) (4 issues indexadas) (4 good first issues abertas)
nf-core/genomeqcNextflow

Compare the quality of multiple genomes, along with their annotations.

Último commit 24 de jul. de 2026

 (24 stars) (24 forks) (3 issues indexadas) (1 good first issue aberta)
nf-core/hlatypingNextflow

Precision HLA typing from next-generation sequencing data

Último commit 10 de jul. de 2026

 (81 stars) (37 forks) (0 issues indexadas) (0 good first issues abertas)
nf-core/kmermaidNextflow

k-mer similarity analysis pipeline

Último commit 27 de jul. de 2026

 (24 stars) (16 forks) (0 issues indexadas) (0 good first issues abertas)
nf-core/pathogensurveillanceNextflow

Surveillance of pathogens using population genomics and sequencing

Último commit 24 de jul. de 2026

 (61 stars) (9 forks) (3 issues indexadas) (1 good first issue aberta)
nf-core/proteinannotatorNextflow

Generation of sequence-level annotations for amino acid sequences

Último commit 27 de jul. de 2026

 (14 stars) (13 forks) (0 issues indexadas) (0 good first issues abertas)
nf-core/sarekNextflow

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Último commit 30 de jul. de 2026

 (589 stars) (539 forks) (6 issues indexadas) (6 good first issues abertas)
nf-core/variantprioritizationNextflow

Bioinformatics analysis pipeline for the functional annotation and translation of somatic SNVs/InDels and copy number abberations for precision cancer medicine using Personal Cancer Genome Reporter (PCGR). The pipeline offers germline SNVs/INDELS intepretation and annotation using Cancer Predisposition Sequencing Reporter (CPSR).

Último commit 3 de jun. de 2026

 (15 stars) (12 forks) (0 issues indexadas) (0 good first issues abertas)