Minimum number of structures to train model

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Assessment

Difficulty
4/5
Estimated time
3-5 days
Newbie friendliness
20/100
Issue type
Bug
Clarity
Needs clarification
Activity status
Stale
Tech stack
jupyter-notebook
Domain
bioinformatics, machine-learning

Research direction

The issue names no files, tests, or entry points. Reproduce training with datasets containing 2 through 10 similar-domain protein structures, then trace the training pipeline to determine whether the ten-structure minimum is intentional; done means the behavior is explained and any needed correction is identified.

Written by the indexing model from the issue text.

Description

Hello,

I was performing some tests and it seems that there is a minimum number of protein structures to train a model. I have tested datasets with 2 through 10 structures (similar domains) and the pipeline runs starting at 10 structures.

Is it correct? or is there something I am not considering?

Thanks

Dominant language
Jupyter Notebook
Stars
568
Forks
74
Avg merge
20h 2m
Merged PRs (30d)
1

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