multiple reads of nasa-nex-gddp-cmip6 dataset from MultiZarrToZarr concatenated metadata returns all nans
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Assessment
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Newbie friendliness
- 45/100
- Issue type
- Bug
- Clarity
- Mostly clear
- Activity status
- Stale
- Tech stack
- jupyter-notebook
- Domain
- data-engineering
Research direction
Start with cells 13 and 14 in datasets/nasa-nex-gddp-cmip6/nasa-nex-gddp-cmip6-example.ipynb and reproduce the point time-series read twice. Inspect the MultiZarrToZarr concatenated metadata behavior, including repeated or parallel reads. Done means the second read returns the same valid values as the first rather than all NaNs.
Written by the indexing model from the issue text.
Description
Simply running twice cells 13 & 14 of the notebook that read and plot point single variable time-series for a point will reproduce this issue where the first run will have the valid values but second will be all nans. I encountered this when parallelizing reading of the files with dask that results in multiple reads and the unexpected result.
- Dominant language
- Jupyter Notebook
- Stars
- 455
- Forks
- 225
- PR merge metrics
- No merged PRs in 30d
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