wurmlab/sequenceserver

Support filename with spaces

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#550 opened on 2021/10/06

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説明

Doesn't work despite c466156ca469d0f4d20ac21c46155f9d7b89e0ba

FASTA file to format: /passenger/yannick/sequenceserver/databases/query sadf copy.fa
FASTA type: nucleotide
Proceed? [y/n] (Default: y): y
Enter a database title or will use 'query sadf copy':
Enter taxid (optional):
Could not create BLAST database for: /passenger/yannick/sequenceserver/databases/query sadf copy.fa
Tried: makeblastdb -parse_seqids -hash_index -in '/passenger/yannick/sequenceserver/databases/query sadf copy.fa' -dbtype nucl -title 'query sadf copy' -taxid 0
stdout:
stderr: BLAST options error: Please provide a database name using -out

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