nextflow-io/nextflow

Add error strategy shortcuts

Open

#563 opened on 2018年1月10日

GitHub で見る
 (11 comments) (0 reactions) (0 assignees)Groovy (784 forks)batch import
good first issue

Repository metrics

Stars
 (3,382 stars)
PR merge metrics
 (平均マージ 16d 9h) (30d で 54 merged PRs)

説明

The errorStrategy 'retry' implicitly terminates the execution when a task exceeds the max number of allowed retries.

There are use cases in which the user wants to ignore of finish the workflow execution. This is possible by using a dynamic error strategy (closure). However it would be useful to provide two new synthetic error strategies to simplifies the above use case, such as:

  • retryThenIgnore: task execution is retried in case of error, if the errors exceed the maximum number allowed the task is ignored by applying the ignore error strategy.
  • retryThenFinish: task execution is retried in case of error, if the errors exceed the maximum number allowed the execution is stopped by applying the finish error strategy.

コントリビューターガイド