DataFile Serialization for REST Scan Planning
Nobody has claimed this yet.
Assessment
- Difficulty
- 5/5
- Estimated time
- Over a week
- Newbie friendliness
- 30/100
Research direction
Start by reading the current DataFile, Record, DataFile.from_args(), and StructProtocol implementation, then compare the REST schema with ContentFileParser.java and the prototype in rest/models.py. The issue is complete only after an agreed deserialization design handles partition, maps, bounds, and content conversions without breaking Avro compatibility.
Written by the indexing model from the issue text.
Description
Related to #2775
In order to support, scan planning for the REST catalog. The API returns file scan tasks as JSON, and I need to deserialize them into DataFile and DeleteFile objects. The API returns JSON like this:
{
"plan-status": "completed",
"delete-files": [
{
"spec-id": 0,
"content": "position-deletes",
"file-path": "s3://bucket/deletes.parquet",
"file-format": "parquet",
"partition": ["test"],
"file-size-in-bytes": 1529,
"record-count": 1,
"column-sizes": {"keys": [2147483546], "values": [134]},
"lower-bounds": {"keys": [2147483546], "values": ["73333A2F..."]},
...
}
],
"file-scan-tasks": [
{
"data-file": {
"spec-id": 0,
"content": "data",
"file-path": "s3://bucket/data.parquet",
...
},
"delete-file-references": [0],
"residual-filter": true
}
]
}
The format is defined in the https://github.com/apache/iceberg/blob/main/open-api/rest-catalog-open-api.yaml#L4337-L4389, and Java parses it via ContentFileParser.java.
Issue
The REST API representation differs from our internal representation:
- Partition is unbound
["test"]instead of a Record - Maps are
{"keys": [...], "values": [...]}instead of{key: value} - Bounds are primitives (bytes, hex)
- content is
position-deletesstring instead of enum int
The current state of our python DataFile:
- Extends
Record(for Avro compatibility) - Uses positional array access (
_data[pos]) - Constructed via
DataFile.from_args()factory - Tightly coupled to Avro reader/writer via
StructProtocol
Our DataFile isn't Pydantic, so we can't just do DataFile.model_validate(json) with validators to handle these conversions. Also, DataFile handles both data files and delete files via the content field. So it's really a content file.
Options
1. Translation layer (RestContentFile)
Create a separate Pydantic model that parses JSON with validators, then converts to DataFile.
Pros:
- Clean separation of concerns
- No risk to Avro code path
- Easy to test independently
Cons:
- Significant code duplication (all fields defined twice)
- Maintenance burden (keep two classes in sync)
- Conversion overhead
- I've prototyped this here and it's quite verbose
Example:
class RestContentFile(IcebergBaseModel):
# All fields with validators...
content: str # Validates and converts to our content enum
partition: list[Any] # Unbound values
def to_datafile(self) -> DataFile:
# Manual conversion logic...
2. Make DataFile Pydantic
Then it could parse JSON directly with pydantic.
The Challenge with this is that DataFile is coupled to Avro for fields, and extends Record. the Avro reader constructs objects with positional args like DataFile(None, None, ...) then fills by index. We'd need to converge here.
3. Manual parsing
Transform raw JSON dict manually and construct DataFile without Pydantic.
Pros:
- No duplication
- Full control over conversion
- Simple and don't need to mess with existing avro functionality
Cons:
- Lose Pydantic's validation benefits
Reccomendation
I'm Leaning towards B, as it would reduce a lot of duplication. However, it seems can't directly extend both Record and BaseModel due to a metaclass conflict.
I'm Leaning towards option 2 since it would reduce a lot of duplication. However, we can't directly extend both Record and BaseModel due to a metaclass conflict, but we can implement the same StructProtocol interface:
class DataFile(IcebergBaseModel):
content: DataFileContent = Field(default=DataFileContent.DATA)
file_path: str = Field(alias="file-path")
file_format: FileFormat = Field(alias="file-format")
# fields with validators for pydantic conversion
# Field order must match DATA_FILE_TYPE for Avro StructProtocol compatibility.
# The Avro reader/writer accesses fields by position, not name.
_FIELD_ORDER: ClassVar[tuple[str, ...]] = ("content", "file_path", ...)
def __new__(cls, *args, **kwargs):
if args and not kwargs:
# Positional args from Avro reader and bypass validation
return cls.model_construct(**dict(zip(cls._FIELD_ORDER, args)))
return super().__new__(cls)
# StructProtocol interface
def __getitem__(self, pos: int):
return getattr(self, self._FIELD_ORDER[pos])
def __setitem__(self, pos: int, value):
setattr(self, self._FIELD_ORDER[pos], value)
def __len__(self):
return len(self._FIELD_ORDER)
But ultimately, I wanted to get input before making changes since this touches a core model. Open to suggestions on the approach.
cc: @Fokko @kevinjqliu @HonahX
- Dominant language
- Python
- Stars
- 1.1k
- Forks
- 589
- Avg merge
- 2d 4h
- Merged PRs (30d)
- 72
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
More from apache/iceberg-python
-
Difficulty 2/5 1-3 hours Newbie friendliness 78/100
apache/iceberg-python#3996 ·
-
bug
Difficulty 2/5 1-3 hours Newbie friendliness 72/100
apache/iceberg-python#3979 ·
-
Difficulty 2/5 1-3 hours Newbie friendliness 78/100
apache/iceberg-python#3885 ·
-
[Bug] PyArrowFileIO fails to propagate s3.ssl.ca-cert to pyarrow.fs.S3FileSystem tls_ca_file_path Open
Difficulty 2/5 1-3 hours Newbie friendliness 76/100
apache/iceberg-python#3866 · 1 comment ·
-
Difficulty 2/5 1-3 hours Newbie friendliness 78/100
apache/iceberg-python#3836 · 1 comment ·
All issues in apache/iceberg-python
Similar issues
-
bug
Difficulty 2/5 1-3 hours Newbie friendliness 90/100
learningequality/ricecooker#747 ·
-
Difficulty 2/5 1-3 hours Newbie friendliness 68/100
BSData/horus-heresy-3rd-edition#3171 ·
-
enhancement
Difficulty 2/5 1-3 hours Newbie friendliness 72/100
-
Difficulty 2/5 1-3 hours Newbie friendliness 76/100
run-llama/llama_index#23199 ·
-
Difficulty 2/5 1-3 hours Newbie friendliness 84/100
KhronosGroup/glTF-Blender-IO#2769 ·