Error in `make_catalog_reproduce.py` script
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Assessment
- Difficulty
- 2/5
- Estimated time
- 1-3 hours
- Newbie friendliness
- 72/100
Research direction
Open scripts/evobio10m/make_catalog_reproduce.py and inspect lines 115-126, starting with how taxon_data is produced and unpacked. Confirm the tuple shape for the two affected datasets, align the validation with that shape, and run the reproduction script to verify that the spurious logger errors no longer appear.
Written by the indexing model from the issue text.
Description
Hi,
It seems like there is an error in the following lines of the make_catalog_reproduce.py script:
There is first a check that the length of the taxon_data tuple is 2 but then it's unpacked to 3 values which doesn't make sense.
In practice there is indeed 3 values and the logger prints an error for every items in those two datasets.
Best,
Rémi
- Dominant language
- Python
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- 278
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- 26
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